2OB5,1OGC,3P12


Conserved Protein Domain Family
RbsD_FucU

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pfam05025: RbsD_FucU (487498 is an unknown moldel)
RbsD / FucU transport protein family
The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD.
Statistics
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PSSM-Id: 487498
Aligned: 213 rows
Threshold Bit Score: 107.129
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OB5_A         7 KNIDPALNADVLHALRAXGHGDTLVISDTNFPSDSVar-qTTVGK-VLHIDNVSAARAXKAILSVLPLDtplqpSVgrxe 84  Agrobacterium f...
1_pfamImport   1 ---GPMTHPGLLAALGRSGHSGKILITDGNYPVASGapaaAERIFlNLAPGLLDVTRILEVLKRTVPIE-----RAglmv 72 
WP_012998581   1 MLLTDLLHPGILEALAGAGHGSRVLLADGHYPASTAtgerARIVHlNLAPGLLDVTTVLDVLLRAIPIE-----SAhvmv 75  Streptomyces
WP_014437008   1 MLKTSLTHPEILGVLGRAGHLARVLITDGNYPHSTRrnpaASTVWaNFRPGLLGGATALELVCDAVPVE-----AVavme 75  Phycisphaera mi...
WP_013109908   1 MLKSKLIHPDILAVLGRAGHHARILIADGNYPASTTmgpnGTLISlNLSPGLVTVNQVLEAILSAIPID-----HVhtmg 75  Planctopirus li...
WP_013628311   1 MLKHQLIHPEINAIIGRAGHHSKILIADGNYPASSTlgpnAELVSlNLAPGLVTVSQVLETLLTAIPID-----VVntmg 75  Rubinisphaera b...
Q7UUK8         1 MLLSNLIHPEISAVCAAAGHHSTILIADGNYPALNKrgpnAKLVSlNLSPGLVSCDQVLKALLSAIPVE-----AAmtmq 75  Pirellula sp.
WP_012909888   1 MLRSTLIHPEISRVLAAAGHHAKILIADGHYPASSKkgpnATVVSmNLMPGLITCDQALQAVLSAVPID-----EIntmn 75  Pirellula staleyi
WP_012924352   1 MLRYPLIHPPLLGALARAGHGSVVLIADGNYPYATAvapgVETIWlNLRPGQVPVDDVLATLLDVVPVE-----AArvma 75  Kribbella flavida
WP_012134501   1 MIKSDIIHPDLLQALAQCGHKANILIADANYSFLTNsspqARIIWlNFSPGLIGSVMILEKILGYINVE-----KAtlmt 75  Citrobacter
2OB5_A        85 vXGAPdq-----lEPVQVEVQQEIDAAEGksapXYGI---ERFAFYEKAKq--AYCVITTGETRFYGCFLLTKGVI 150 Agrobacterium fabru...
1_pfamImport  73 pAADAvgieapevIPAHDEYRAALPGv-----aFDEI---PRWDFYDAAKaedVTVVIVSADQRLYANLLLTIGVR 140
WP_012998581  76 pPKGEp------ePPAIAEYRDRLAPv-----pVETL---GRFEFYDAARysdVALAIVTADTRTYANLLLTIGVR 137 Streptomyces
WP_014437008  76 pEREGayam-tgdPPVWAHYRRVLAERAGftggFDAL---QKPAFNREAMsedLCLVIATGEQALFANILLTIGVV 147 Phycisphaera mikure...
WP_013109908  76 iPADDpyaq-lgdPPVWKEFSATMAA-AGlsipLTPI---SKWDFYEEVKstdHVLTIQTGDVALWANLLLKVGVR 146 Planctopirus limnop...
WP_013628311  76 iPADDpyag-qgdPPVWAEYRQILKD-AGseveLEPI---QKWDFYEAVAsrdLVLTIQTGDQALWANLLLSIGVR 146 Rubinisphaera brasi...
Q7UUK8        76 tEADGpyal-dgdPPVWEEYRKSFKE-AGskveLQPL---EKWSFYDHVItddHVLTIQTGDQQRYANLLLTLGVR 146 Pirellula sp.
WP_012909888  76 yPKDDpytl-dsdPPVWNEYRQTLAK-LGmnleLKPI---DKWDFYDAVAtadHVLTIQTADTQRFANLLLSIGVR 146 Pirellula staleyi
WP_012924352  76 tATGEe-------PDIYSRFRELLPGt-----tLLPL---PREDFYAVARspeLAVAVATGEQRLYANILLTLGVV 136 Kribbella flavida
WP_012134501  76 sPAEFd-------NTIEREYRGLLSE-------MTELahvERNAFYALAKssdTLLVIASGETRRFANILLTVGPT 137 Citrobacter
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