2OB5,1OGC


Conserved Protein Domain Family
RbsD_FucU

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pfam05025: RbsD_FucU 
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RbsD / FucU transport protein family
The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD.
Statistics
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Aligned: 299 rows
Threshold Bit Score: 85.15
Threshold Setting Gi: 122420818
Created: 5-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OB5_A                 7 KNIDPALNADVLHALRAXGHGDTLVISDTNFPSDSVar-qTTVGK-VLHIDNVSAARAXKAILSVLPLDtplqpSVgrxe 84  Agrobac...
Q15PP4                 1 MLKTAVIHPTILEALGRSGHFAQVVIADGNLPVAAMtgpnSTLVHlNFRPGMLDALSVLEGILEVCPIQ-----GAivme 75  Pseudoa...
wugsc:CKO_03729        1 MIKSDIIHPDLLQALAQCGHKANILIADANYSFLTNsspqARIIWlNFSPGLIGSVMILEKILGYINVE-----KAtlmt 75  Citroba...
utah:Sant_2335         1 MLKSEILHPQLLGSLAQCGHKTLILIADSNYSVVTNsspgATIVYlNFAPDMIGSPVILEKLLTYINVE-----KAtlma 75  Sodalis...
jcvi:HMPREF9154_0927   1 mlyGPMTHPGLLAALGRSGHSGKILITDGNYPVASGapaaAERIFlNLAPGLLDVTRILEVLKRTVPIE-----RAglmv 75  Pseudop...
CBG67845               1 MLLTDLLHPGILEALAGAGHGSRVLLADGHYPASTAtgerARIVHlNLAPGLLDVTTVLDVLLRAIPIE-----SAhvmv 75  Strepto...
jgi:Hore_09590         1 MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKtkedVNKVYlNLAPGLVNVTDVLKVLVEVINIE-----EAtvma 75  Halothe...
jgi:TepRe1_1800        1 MLKTSCINPEIMSTLACCGHGDKILIADGNYPIESNtntnTKKAYiNLSHGIPTVTQVLNVLSNTITIE-----KAevma 75  Tepidan...
Q896U5                 1 MLKIKCLNPQLIRALAHCGHGDKILICDGNYPIDSCtsetTEKVYlQLTHGIPMVTDVLKVLVESINIE-----RAqvmt 75  Clostri...
WP_021845820           1 MLKGKLIHPELIHQLALCGHGSKILIADGNYPLEEKs--sGVKIFlGLGPGVPSVIEVLAAIHSVCEIE-----KAqvmv 73  Blautia...
2OB5_A                85 vXGAPdq-----lEPVQVEVQQEIDAaegkSAPXYGI---ERFAFYEKAKq---AYCVITTGETRFYGCFLLTKGVI 150 Agrobacter...
Q15PP4                76 kPPEAn-------AEIHTAYQALLGD-----VTWEAM---ERWAFYDKIRap-aTTLIIQTGEQRRFANLILTVGVV 136 Pseudoalte...
wugsc:CKO_03729       76 sPAEFd-------NTIEREYRGLLSE-------MTELahvERNAFYALAKss-dTLLVIASGETRRFANILLTVGPT 137 Citrobacte...
utah:Sant_2335        76 sPDDFe-------NTIEKEYQRLLPF-------ETEYcwlQRDDFYRQAKss-dTLLVIASGETRRFANILLTVGVV 137 Sodalis pr...
jcvi:HMPREF9154_0927  76 pAADAvgieapevIPAHDEYRAALPG-----VAFDEI---PRWDFYDAAKae-dVTVVIVSADQRLYANLLLTIGVR 143 Pseudoprop...
CBG67845              76 pPKGEp------ePPAIAEYRDRLAP-----VPVETL---GRFEFYDAARys-dVALAIVTADTRTYANLLLTIGVR 137 Streptomyc...
jgi:Hore_09590        76 pSKGDk-------PAIFKEFKRILSS----GTDFNEI---GRFEFYDKCVsnqdLCLVIVTGEQRIYANILLTIGVV 138 Halothermo...
jgi:TepRe1_1800       76 tDDGQe-------PLIFQEFKKILGT----EATLYDL---NRFKFYEECKke-nVKLAIATGEQRVYANILLTVGVV 137 Tepidanaer...
Q896U5                76 pGEGEe-------PTIFNEFREILSN----EIQLDEL---GRFEFYDESKen-nIRLAIATGEKRIFANILLTVGVV 137 Clostridiu...
WP_021845820          74 pEDDRe-------PEIFGEFRRELPD-----LELEEL---ARYDFYAACMeegvLKLAVSTGEQRTFANILLTVGCV 135 Blautia hy...
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