Conserved Protein Domain Family
SseC

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pfam04888: SseC 
Secretion system effector C (SseC) like family
SseC is a secreted protein that forms a complex together with SecB and SecD on the surface of Salmonella. All these proteins are secreted by the type III secretion system. Many mucosal pathogens use type III secretion systems for the injection of effector proteins into target cells. SecB, SseC and SecD are inserted into the target cell membrane. where they form a small pore or translocon. In addition to SseC, this family includes the bacterial secreted proteins PopB, PepB, YopB and EspD which are thought to be directly involved in pore formation, and type III secretion system translocon.
Statistics
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PSSM-Id: 428175
Aligned: 17 rows
Threshold Bit Score: 78.7063
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7NUX0   100 MIMASTLMTSQMLGDTAAVKSKALDIMSTKQEAlRKKEVENIREQMNKAieqqDKAKKAGILSVVFDWVVAAVEVVTGVA 179 Chromobacterium vio...
Q6MBE0   331 LKATLREIQVHDAEKSKENAKAKFGELADRRLR-AQEQAEKMEKMLKKQ----KQMKSMGLAMKIIGPIIAALSTIIGTL 405 Candidatus Protochl...
O84583   141 LMGLIMTLLAQASAKSWSSSFQQQNQAIQNQVAmAPEIGNAIRTQANHQaqatELQAQQSLISGITNIVGFAVSVGGGIL 220 Chlamydia trachomat...
Q326S9   252 LMATFIQLVGKNNEESLKNDLALFQSLQESRKTeMERKSDEYAAEVRKAe---ELNRVMGCVGKILGALLTIVSVVAAAF 328 Shigella dysenteria...
Q56019   259 LMAMFIEIVGKNTEESLQNDLALFNALQEGRQAeMEKKSAEFQEETRKAe---ETNRIMGCIGKVLGALLTIVSVVAAVF 335 Salmonella enterica...
Q7NUS8   256 LMAMFVELVGKNSEESLKNDLALFQALQEGRQKeMDKKSAEYQEEVRKAe---ELNRTMGCIGKILGALLTVVSVVAAAF 332 Chromobacterium vio...
Q63K34   284 vlGKLQELISSGNVKELESKQKLFTEMQAKREAeLQKKSDEYQAQVKKAe---EMQKTMGCIGKIVGWVITAVSFAAAAF 360 Burkholderia pseudo...
Q7VWI4    80 ladllrvLRSRAVDGQLATARENLQDAQVKAKQnTQAQLDKLDAWFRKA----EDAESKGWLSKVFGWIGKVLAVVASAL 155 Bordetella pertussis
CDM23295  79 L---LRSLRSKSDDAQLATAQKSLESARIKAEKnTEHQLEKIKEWIEKS----KEAESKGALGKIFGWIGKIFAFVAAIA 151
O84947    93 LSMMMTSLILNVFGNNAQSLCQQLERATEVQNAlRNKQVKEYQEQIQKAieqeDKARKAGIFGAIFDWITGIFETVIGAL 172 Salmonella enterica...
Q7NUX0   180 KMIGGVMTgNVMQAAggAMDLV--AGMAGLVKAMANTMALIDPENaekyQKVADIA-----------------------G 234 Chromobacterium vio...
Q6MBE0   406 IAIASLGTaTAASVA--IIAAGvaVGIAMTAYSIADSVTGVTQKIitafKDALDKLm---------------------pD 462 Candidatus Protochl...
O84583   221 SASKSLGGlKSAAFTneTASAT--TSATSSLAKTATS------------------------------------------- 255 Chlamydia trachomat...
Q326S9   329 SGGSSLAL-AAVGLA---------LMVTDAIVQAATGNSFMEQAL----NPIMKAVieplikllsdaftkmleglgvdsK 394 Shigella dysenteria...
Q56019   336 TGGASLAL-AAVGLA---------VMVADEIVKAATGVSFIQQAL----NPIMEHVlkplmeligkaitkaleglgvdkK 401 Salmonella enterica...
Q7NUS8   333 TGGASLAL-AAVGVA---------LMVADEVVKAATGVSFMQEAL----KPLMDKVlkplmdligkaitkalegmgvdkK 398 Chromobacterium vio...
Q63K34   361 TGGASLAL-AAVGLA---------LAVGDEISRATTGVSFMDKLM----QPVMDAIlkplmemisslitkalvacgvdqQ 426 Burkholderia pseudo...
Q7VWI4   156 AVGFAAVAsVVTGAAatPMLV---LSGMALVSAVTSLADQISREAggppislggflsg--------lagrlltalgvdqS 224 Bordetella pertussis
CDM23295 152 AVVAAAAAtVATGGAaaPLLA---LAIVGAISATMTLASAISQECggpeisinsliqht-------vgkfltdvcgvdpK 221
O84947   173 KVVEGFLSgNPAEMAsgVAYMA--AGCAGMVKAGAETAMMCGADHdt-cQAIIDVT-----------------------S 226 Salmonella enterica...
Q7NUX0   235 KIQLSFEIAGAVV-DVTSAARNL--LVTKMIPKVAGkvlkegaEQMVSTAIKKGTAGAAKNAANAVGKQVADQVATQ--- 308 Chromobacterium vio...
Q6MBE0   463 SPDWVKSLVKALIvAAVVAVLAV--IIVLAMASGSG-------AGAATNAASQAVQQTIRIAVTEAIKQMALQAMIMaim 533 Candidatus Protochl...
O84583   256 --------------ALDDVAGTA--TAVGAKATSGAasaassaATKLTQNMAESASKTLSQTASKSAGGLFGQALNTpsw 319 Chlamydia trachomat...
Q326S9   395 KAKMIGSILGAIA-GALVLVAAV--VLVATVGKQA--------AAKLAENIGKIIGKTLTDLIPKFLKNFSSQLDDL--- 460 Shigella dysenteria...
Q56019   402 TAEMAGSIVGAIV-AAIAMVAVI--VVVAVVGKGA--------AAKLGNALSKMMGETIKKLVPNVLKQLAQNGSKL--- 467 Salmonella enterica...
Q7NUS8   399 TAELAGSIAGAVL-AAVAMVVVM--VVVAVVGKGA--------AGKLGGALSKLLGDAIKKIVPNVLKELAKGGSKM--- 464 Chromobacterium vio...
Q63K34   427 KAELAGAILGAVV-TGVALVAAA--FVGASAVKAVAskvidamAGQLTKLMDSAIGKMLVQLIEKFSEKSG--------- 494 Burkholderia pseudo...
Q7VWI4   225 QADQIAKIVAG---LAVPAVLLIepQMLGEMAEGVAr------LAGAGDATAGYIAMAMSIVAAIAVAAINAAGTAGags 295 Bordetella pertussis
CDM23295 222 QAENICKIVGGALaIACPVMLAIepSLLGNMAQSIAl------MAGADEKTAGYIGMALTIAAAIGIGIAMAVMTGGasa 295
O84947   227 KIQFGCEAVALAL-DVFQIGRAF--MATRGLSGAAAkvldsgfGEEVVERMVGAGEAEIEELAEKFGEEVSESFSKQfep 303 Salmonella enterica...
Q7NUX0   309 ------VAQALGKAAVDAAkattkktvekfaqkftnqmlerftheaiekmvsksvekvikKAVKEGVeltaqevtkrvvn 382 Chromobacterium vio...
Q6MBE0   534 ssnalpELVGGILKASGVD-----------------------------------------KKTQQIV------------- 559 Candidatus Protochl...
O84583   320 sekvsrGMNVVKTQGTRAA-----------------------------------------KFAGRALssamnis------ 352 Chlamydia trachomat...
Q326S9   461 ------ITNAVARLNKFLG-----------------------------------------AAGDEVI------------- 480 Shigella dysenteria...
Q56019   468 ------FTQGMQRITSGLG-----------------------------------------NVGSKMGlqt--------na 492 Salmonella enterica...
Q7NUS8   465 ------LTQGFQRLANSLGlqt--------------------------------------------------------da 482 Chromobacterium vio...
Q63K34   495 -------LQALGSRTATAM-----------------------------------------TRMRRAIgve--------ak 518 Burkholderia pseudo...
Q7VWI4   296 asairgAWDRAAAVATQV-------------------------------------------------------------- 313 Bordetella pertussis
CDM23295 296 astaaqVSNKVLLSSIKTFntvla-------------------------------------------------------- 319
O84947   304 leremaMANEMAEEAAEFSrnvennmtrsagksftk--------egvkamakeaakealeKCVQEGGkfllkkfrnkvlf 375 Salmonella enterica...
Q7NUX0   383 qVFADVVKATIKATlkapalvvsstvrgvAAGAKEIMVGEIEKQRAKLQKEIDLLILDQQWLQS--FFEFYEQEKKEVIK 460 Chromobacterium vio...
Q6MBE0   560 -EMVVMAITLIACVi-------------aMAKVGGAKSGGTEQKAADAAEEATKEAAKTVTQRAsdALKDFKSQLDNVKE 625 Candidatus Protochl...
O84583   353 -----------------------qmvhglTAGIDGIVGGVIGAQVAQEQRMAGMAEARAEE------LKSLNSVQAQYAS 403 Chlamydia trachomat...
Q326S9   481 -SKQIISTHLNQAVl-------------lGESVNSATQAGGSVASAVFQNNASTNLADLTLSKY--QVEQLSKYISEAIE 544 Shigella dysenteria...
Q56019   493 lSKELVGNTLNKVAl-------------gMEVTNTAAQSAGGVAEGVFIKNASEALADFMLARF--AMDQIQQWLKQSVE 557 Salmonella enterica...
Q7NUS8   483 aAKQMMANTLGRVVv-------------gGEVAQATSQAGGNVAQGVFMKNASDALADFTLARA--AMEQIEQWLKQAVE 547 Chromobacterium vio...
Q63K34   519 eDGMLLANRFEKAGt-------------vMNVGNQVSQAAGGIVVGVERAKAMGLLADVKEAMY--DIKLLGDLLKQAVD 583 Burkholderia pseudo...
Q7VWI4   314 -----------------------------LQGGTAVAQGGVGVSMAVDRKQADLLVADKADLAA--SLTKLRAAMEREAD 362 Bordetella pertussis
CDM23295 320 ------------------------stnvaVSGSTQIAQGGLNISKAQSEEKAQKAMADKKDLEA--MMLKLQKQMEEGRE 373
O84947   376 nMFKKILYALLRDC------------------------------------------------------------------ 389 Salmonella enterica...
Q7NUX0   461 KTRELLDSKSQVIDDGLQAMSQ--AASTQAQIASS 493 Chromobacterium violaceum
Q6MBE0   626 SIKKLPETMQQEFKSMMQGFKNldKWDVLNAVAQS 660 Candidatus Protochlamydia amoebophila UWE25
O84583   404 QAQQLQEQSQQSFNSALQTLQS--ISDSALQTTAS 436 Chlamydia trachomatis D/UW-3/CX
Q326S9   545 KFGQLQEVIADLLASMSNSQAN--RTDVAKAILQQ 577 Shigella dysenteriae Sd197
Q56019   558 IFGENQKVTAELQKAMSSAVQQ--NADASRFILRQ 590 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Q7NUS8   548 VFASTQKVTQELTTAMSAAVQQ--NAEAGRFVLRQ 580 Chromobacterium violaceum
Q63K34   584 AFAEHNRVLAQLMQQMSDAGEM--QTSTGKLILRN 616 Burkholderia pseudomallei K96243
Q7VWI4   363 DIKKILAQFDAAYHMIAQMISD--MASTHSQVSAN 395 Bordetella pertussis
CDM23295 374 EMKKIIQQIEESTQLVSKMIAG--TTDNMNQIAMN 406
O84947   390 ------------------------SFKGLQAIRCA 400 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
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