Conserved Protein Domain Family
Pec_lyase_N

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pfam04431: Pec_lyase_N 
Pectate lyase, N-terminus
This region is found N terminal to the pectate lyase domain (pfam00544) in some plant pectate lyase enzymes.
Statistics
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PSSM-Id: 398232
Aligned: 35 rows
Threshold Bit Score: 64.1796
Threshold Setting Gi: 944082516
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002517472  25 IGYYDEVWKKRAEEAKKNMMDAYVANPLEVTTEFNNQTNEgkEKNGTvgsgkgevnttssfseaentnddnneeneddnd 104 castor bean
Q6H8B0        33 IGEFDEHWEKRRAAAEAAAEEVYKPDPFNVTNEFNHAVIR--STERG--------------------------------- 77  Japanese rice
Q5VP91        35 IGEYDEYWQKRKLMADAAAEATYKRDPFEVTNSFNRAVHR--SEEES--------------------------------- 79  Japanese rice
XP_002437204  33 IGDFDDYWRQRKLMADAAAEATYKHDPLEVTNQLNRAVHR--SVEKEd-------------------------------- 78  sorghum
KQK17868      33 IGDFDEHWQQRKAAARAAAEAIYQSDPLEVANSLNRAVHR--ATKEDd-------------------------------- 78  stiff brome
XP_003530685  36 VYEFDSYWQERAKAAKVDSQAAYFEDPYSVSSNFTSSVSE--LTIGK--------------------------------- 80  soybean
O64510        27 IAEYDEYWTQRQTNALRETLESYDPNPENVTDHFNYHAAL--AMETTgi------------------------------- 73  thale cress
XP_009129128  31 IAVFDDYWTQRQANALRQTMESYEPNPLNVTNHFNYHAAL--AMETTga------------------------------- 77  field mustard
Q9M9S2        31 VAVFDSYWTQRQSDALKQTIGSYDPHPLNVTNHFNYHVNI--AVDASes------------------------------- 77  thale cress
VDC65684      31 IAVFDDYWTQRQGDALKQTLASFDPYPLNVTNHLNYHVAL--ALDTTes------------------------------- 77  field mustard
XP_002517472 105 ewnetkgnftkefeketNSTRRNL 128 castor bean
Q6H8B0        78 ------------------VLRREL 83  Japanese rice
Q5VP91        80 -------------------GRREL 84  Japanese rice
XP_002437204  79 -----------------MSTRRra 85  sorghum
KQK17868      79 -----------------AGTRRSm 85  stiff brome
XP_003530685  81 -----------------KDLRRNL 87  soybean
O64510        74 ----------------vNETRRDL 81  thale cress
XP_009129128  78 ----------------dNGTRREL 85  field mustard
Q9M9S2        78 ----------------rNDTRREL 85  thale cress
VDC65684      78 ----------------tNSTRREL 85  field mustard
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