1QHL


Conserved Protein Domain Family
MukB

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pfam04310: MukB 
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MukB N-terminal
This family represents the N-terminal region of MukB, one of a group of bacterial proteins essential for the movement of nucleoids from mid-cell towards the cell quarters (i.e. chromosome partitioning). The structure of the N-terminal domain consists of an antiparallel six-stranded beta sheet surrounded by one helix on one side and by five helices on the other side. It contains an exposed Walker A loop in an unexpected helix-loop-helix motif (in other proteins, Walker A motifs generally adopt a P loop conformation as part of a strand-loop-helix motif embedded in a conserved topology of alternating helices and (parallel) beta strands).
Statistics
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PSSM-Id: 427856
Aligned: 7 rows
Threshold Bit Score: 325.592
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1QHL_A            2 IERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKL 81   Escherichia...
ACQ68429          2 TARGKFHSLTLINWNGFFAQTFDLDVLVTTLSGGNGAGKSTVMAAFVTALIPDLTLLHFRNTTEAGATTGSRDKGLHGKL 81  
Q9KRC8            2 IERGKYQSLTMINWNGFFARTFDIDNLVTTLSGGNGAGKSTTMAAFITALIPDQSLLHFRNTTEAGSSQASRDKGLYGKL 81   Vibrio chol...
jgi:Thimo_2687    1 msRTHAQTLVLVNWKGVFYERYLIDRHVTALEGANGAGKTTVMIAAYVVLLPDMSRLRFTNLGETGATGG--DKGIWGRL 78  
WP_014292585      3 VSRGKFQSLTMVNWNGFFARTFDLDQLVTTLSGGNGAGKSTTMAAFIAALIPDLSLLHFRNTTEAGSQSGSRDKGLYGKL 82   Oceanimonas...
WP_015878550      2 ITRGKFLSFTMINWNGFFARTFELDQMVTTLSGGNGAGKSTSMAALITALIPDQTLLHFRNTTEAGSSSASRDRGLYGKL 81   Tolumonas a...
WP_011706219      1 -mRGKFKSLTMVNWNGFFARTFDLDQLVTTLSGGNGAGKSTTMAAFIAALIPDQSLLHFRNTTEAGSSSASRDKGLYGKL 79   Aeromonas h...
1QHL_A           82 -KAGV-CYSMLDTINSRHQRVVVGVRLQQVAGRDRK----VDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKD 155  Escherichia...
ACQ68429         82 -KAGI-CYCILDVSNSKQQRLLVGVRLQQVSGRDRK----VDIKPFSIQGLSKDIKPTEILTERLGDCQARVISLIELKS 155 
Q9KRC8           82 -QAGA-CYAALDVVNSRNQRLLFAVKLQQVAGRDKK----VDIKPFLIQGLPSHVKPTDVLVETVSDKHARVRQINEVKD 155  Vibrio chol...
jgi:Thimo_2687   79 gEPGRpAYSAIEFALASGQCLIAGVHL------DRKgepsVEPTPFIISGLDTDVRLQDVLLLSQGD-HEVVPELNELRE 151 
WP_014292585     83 -QRGH-CYSLIEVTTSQQERVWFGVHLEQVANRDNK----VNMVPFALQSLAEGAAPTELLLSRLDDGRGQVRSLNELKA 156  Oceanimonas...
WP_015878550     82 -QRGH-CYSMIDVRNSKGQRLWFGVHLEQVANRDNK----VNITPFCMLDVPDSLQPTDFLLEKLDGDKAKVRPFNELRK 155  Tolumonas a...
WP_011706219     80 -QRGH-CYSLLEVMNSREQRIWVGVHLEQVANRDNK----VNITPFALVDVPEQLQPTDLLLEKLDDGKGRVRAFADLKG 153  Aeromonas h...
1QHL_A          156 KLEAMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSG 227  Escherichia coli
ACQ68429        156 RLEKQEGAEFKQFQSIMDYHSFMFDMGIIPKRMRSSADRSKFYRLIEASLYGGISTAITRSLRDYLLPENIG 227 
Q9KRC8          156 AVGQIEGAHFKSFPSIVDYHAQMFEFGVIPKKLRNSSDRSKFYRLIEASLYGGISSAITRSLRDYLLPQNGG 227  Vibrio cholerae O1 ...
jgi:Thimo_2687  152 NAARFGG-RLQIFGTARDYFAALFDHGVTPLRLATDEERNKLNEMLRTSMTGGISRALTSELRSFLLKEETG 222 
WP_014292585    157 AATN-AGLRFARFNTVSEYHNFLFDMGVTPRKLKDQRDRVKFYRLIEASLYGGISSTISRSLKDYLLPENAG 227  Oceanimonas sp. GK1
WP_015878550    156 QAAELGAIRFVKFNSVTDYHNVMFEYGVTAKKLRDQRDRSRFYRLIEASLYGGISSSISRSLREYLLPENSG 227  Tolumonas auensis
WP_011706219    154 AAAELGALKVAKFNTVTDYHNFMFEFGITPKKLRDQKDRGKFYRLIEASLYGGISSSISRSLREYLLPENSG 225  Aeromonas hydrophila
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