1U22


Conserved Protein Domain Family
Meth_synt_2

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pfam01717: Meth_synt_2 
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Cobalamin-independent synthase, Catalytic domain
This is a family of vitamin-B12 independent methionine synthases or 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferases, EC:2.1.1.14 from bacteria and plants. Plants are the only higher eukaryotes that have the required enzymes for methionine synthesis. This enzyme catalyzes the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to homocysteine. The aligned region makes up the carboxy region of the approximately 750 amino acid protein except in some hypothetical archaeal proteins present in the family, where this region corresponds to the entire length. This domain contains the catalytic residues of the enzyme.
Statistics
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PSSM-Id: 366771
Aligned: 10 rows
Threshold Bit Score: 273.155
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1U22_A       432 LPTTT-IGSFPQTVELRRVRREYKAKKVSE-EDYVKAIKEEIKKVVDLQEELDIDVLVHGEPERNDXVEYFGEQLSGF-A 508 thale cress
P05694       439 FPTTT-IGSFPQTKDIRINRNKFNKGTISA-EEYEKFINSEIEKVIRFQEEIGLDVLVHGEPERNDMVQYFGEQINGY-A 515 Saccharomyces c...
P80877       430 LPTTT-IGSFPQSAEVRSARQKWRKAEWSD-EQYQNFINAETKRWIDIQEELELDVLVHGEFERTDMVEYFGEKLAGF-A 506 Bacillus subtil...
O67606       429 FPTTT-IGSFPQTEDVRKMRTAYRTGKISE-EEYKNFIKQKIKYAIEVQEDIGLDVLVHGEFERSDMVEYFAIKLDGI-A 505 Aquifex aeolicu...
P25665       426 WPTTT-IGSFPQTTEIRTLRLDFKKGNLDA-NNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGF-V 502 Escherichia col...
O26869         1 MITTV-VGSYPTEPRGPETLGERLLNFFG----SYDRYRPAIEAAVRDQFRAGVDIISDGQ-VRGDMVGHFAAAIGGMkI 74  Methanothermoba...
P45331       427 LPTTN-IGSFPQTTEIRHARASFKKGELSL-ADYEAAMKKEIEYVVRRQEELDLDVLVHGEAERNDMVEYFGELLDGF-A 503 Haemophilus inf...
EDO96787     445 FPTTT-IGSFPQTAEVRRLRQQLKSGRLTQ-AEYEGLIAGHIAHAVGVQEALGIDVLVHGEAERTDMVEYFGMQLGGM-L 521
P9WK07       432 LPTTT-IGSYPQTSAIRVARAALRAGEIDE-AEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGF-F 508 Mycobacterium t...
WP_003415268   4 FATATgIGSWPGTAAREAAQVVVGELAGALaYLTELPARGVGADMLGRAGGLLVDVAIDTVP-RGYRIAARPGAVTRRaA 82  Mycobacterium
1U22_A       509 FTANGWVQSYGSRCVKPPVIYGDVSRPKAXTVFWSAXAQSXTSRP--XKGXLTGPVTILNWSFVR---NDQPRHETCYQI 583 thale cress
P05694       516 FTVNGWVQSYGSRYVRPPIIVGDLSRPKAMSVKESVYAQSITSKP--VKGMLTGPITCLRWSFPR---DDVDQKTQAMQL 590 Saccharomyces c...
P80877       507 FTKYAWVQSYGSRCVRPPVIYGDVEFIEPMTVKDTVYAQSLTSKH--VKGMLTGPVTILNWSFPR---NDISRKEIAFQI 581 Bacillus subtil...
O67606       506 TTKHGWVLSYGSRVYRPPIIYGDVSRPAPMTLEEITYAQSLTNKP--VKGMLTGPVTILNWSYYR---EDVPKREIAYQI 580 Aquifex aeolicu...
P25665       503 FTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKP--VKGMLTGPVTILCWSFPR---EDVSRETIAKQI 577 Escherichia col...
O26869        75 EDGTSIIYSRITPP-------AGSIGAADLRYAYRILRGLTDDESrgVKGIITGPSTMIYASRIEgfyDPQKRDRAVMDM 147 Methanothermoba...
P45331       504 FTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTNRV--MKGMLTGPVTILQWSFVR---NDIPRSTVCKQI 578 Haemophilus inf...
EDO96787     522 FTRAGWVQSYGSRCVRPPLVVDDITYRGPMTCWEYKVASAYTRKP--VKGMLTGPVTILNWSFPR---KDISRAAQAMQL 596
P9WK07       509 ATQNGWVQSYGSRCVRPPILYGDVSRPRAMTVEWITYAQSLTDKP--VKGMLTGPVTILAWSFVR---DDQPLADTANQV 583 Mycobacterium t...
WP_003415268  83 SLLDEDMDALEEAWETAG------LRGCGRAVKVQAPGPVTLVAG---LELANGHRAITDPGAVR------DLAASLAEG 147 Mycobacterium
1U22_A       584 ALAIKDEVE-DLEKGGIGVIQIDEA---ALREGLPLRK--SEHAFYLDWAVHSFRITNCGVQDSTQIHTHXCYSHFNDIi 657 thale cress
P05694       591 ALALRDEVN-DLEAAGIKVIQVDEP---ALREGLPLREg-TERSAYYTWAAEAFRVATSGVANKTQIHSHFCYSDLDPN- 664 Saccharomyces c...
P80877       582 GLALRKEVK-ALEDAGIQIIQVDEP---ALREGLPLKT--RDWDEYLTWAAEAFRLTTSSVKNETQIHTHMCYSNFEDIv 655 Bacillus subtil...
O67606       581 ALALLDEVK-DLENAGIKVIQIDEP---AFREGAPLKK--RDWPEYFDWAVKAFRLASR-AKPETQIHTHMCYSEFNEIi 653 Aquifex aeolicu...
P25665       578 ALALRDEVA-DLEAAGIGIIQIDEP---ALREGLPLRR--SDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIm 651 Escherichia col...
O26869       148 AGVLKIEAK-HLQDAGAAMIQIDEP---FLSTGIVDMK------------TAGRAIDHIAAGLDIEVSLHVCGDIRNVLs 211 Methanothermoba...
P45331       579 GVALSDEVL-DLEAAGIKVIQIDEP---AIREGLPLKR--ADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDIl 652 Haemophilus inf...
EDO96787     597 GLALRQEVA-ALEAAGCTIIQVDDP---ALREGLPLKR--ERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSDFQDIl 670
P9WK07       584 ALAIRDETV-DLQSAGIAVIQVDEP---ALRELLPLRR--ADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVi 657 Mycobacterium t...
WP_003415268 148 VAAHRAALArRLDTP--VVVQFDEPslpAALGGRLTGVtaLSPVAPLDETVAEALLDTCIAAVDADVALHSCSPDLPWDl 225 Mycobacterium
1U22_A       658 ---hSIIDXDADVITIENSRSDekLLSVFREgVKYGAGIGPGVYDIHSP-RIPSSEEIADRVNKXLAV------LEQNIL 727 thale cress
P05694       665 ----HIKALDADVVSIEFSKKD--DANYIAEfKNYPNHIGLGLFDIHSP-RIPSKDEFIAKISTILKS------YPAEKF 731 Saccharomyces c...
P80877       656 ---dTINDLDADVITIEHSRSHggFLDYLKN-HPYLKGLGLGVYDIHSP-RVPSTEEMYNIIVDALAV------CPTDRF 724 Bacillus subtil...
O67606       654 ---eYIYQMDFDVISIEASRSKgeIIEVFEKfKGWDRQIGIGVYDIHSP-AIPTKEEMKAIMLRAMKV------LPKELL 723 Aquifex aeolicu...
P25665       652 ---dSIAALDADVITIETSRSDmeLLESFEE-FDYPNEIGPGVYDIHSP-NVPSVEWIEALLKKAAKR------IPAERL 720 Escherichia col...
O26869       212 ----DLLRFKVDVLDLEFAGRPs-NLEVLEEkWRGDKGVGFGCVDTTTE-RVESMEEIRNLIKRGADIvg------eENL 279 Methanothermoba...
P45331       653 ---pAIAALDADVITIETSRSDmeLLTAFAD-FKYPNDIGPGVYDIHSP-RVPTATEVEHLLRKALNV------IPKERL 721 Haemophilus inf...
EDO96787     671 ---pAIDRMDADVLTIENSRSDnaMMAALAA-AGYGRDIGPGVYDVHSP-VVPSVEFIKSRIRSFVDSgi--lsGRYDRI 743
P9WK07       658 ---gAIADLDADVTSIEAARSHmeVLDDLNA-IGFANGVGPGVYDIHSP-RVPSAEEMADSLRAALRA------VPAERL 726 Mycobacterium t...
WP_003415268 226 lqrsRISAVSVDASTLQAADLD--AVAAFVE---SGRTVVLGLVPVTAPeRAPSMEEVAAAAVAVTDRlgvprsALRDRL 300 Mycobacterium
1U22_A       728 WVNPDCGLKTRKYTEVKPALKNXVDAAK 755 thale cress
P05694       732 WVNPDCGLKTRGWEETRLSLTHMVEAAK 759 Saccharomyces cerevisiae S288C
P80877       725 WVNPDCGLKTRQQEETVAALKNMVEAAK 752 Bacillus subtilis subsp. subtilis str. 168
O67606       724 WVNPDCGLKTRRWEEVIPALRNMVDMAK 751 Aquifex aeolicus VF5
P25665       721 WVNPDCGLKTRGWPETRAALANMVQAAQ 748 Escherichia coli K-12
O26869       280 YIDPDCGMRKLPRKAAFSKLRNMVMAAG 307 Methanothermobacter thermautotrophicus str. Delta H
P45331       722 WVNPDCGLKTRGWTETIDQLKVMVDVTK 749 Haemophilus influenzae Rd KW20
EDO96787     744 WVNPDCGLKTRGWPETIAALRNMVEAAA 771
P9WK07       727 WVNPDCGLKTRNVDEVTASLHNMVAAAR 754 Mycobacterium tuberculosis H37Rv
WP_003415268 301 GVSPACGLANATGQWARTAVGLARDVAE 328 Mycobacterium
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