Conserved Protein Domain Family
Cytochrom_C_asm

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pfam01578: Cytochrom_C_asm 
Cytochrome C assembly protein
This family consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria; CycK from Rhizobium, CcmC from E. coli and Paracoccus denitrificans.and orf240 from wheat mitochondria. The members of this family are probably integral membrane proteins with six predicted transmembrane helices. It has been proposed that members of this family comprise a membrane component of an ABC (ATP binding cassette) transporter complex. It is also proposed that this transporter is necessary for transport of some component needed for cytochrome c assembly. One member CycK contains a putative heme-binding motif, orf240 also contains a putative heme-binding motif and is a proposed ABC transporter with c-type heme as its proposed substrate. However it seems unlikely that all members of this family transport heme nor c-type apocytochromes because CcmC in the putative CcmABC transporter transports neither. CcmF forms a working module with CcmH and CcmI, CcmFHI, and itself is unlikely to bind haem directly.
Statistics
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PSSM-Id: 307628
Aligned: 39 rows
Threshold Bit Score: 94.7331
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P36180 102 WSNHEGSLLLWCWILSFYGFLFCYLARPcnvSKQAKGAENKNIsflfsskgldqreravslideqqiykgIALFFSIFll 181 liverwort
P16645  66 VLNVTEALYFYAWVLVTLSLVLTKLLRVdfiVFFTNVIGFSMI---------------------------AIHTFSPT-- 116 Bacillus subtilis sub...
O66467  59 VGDVYGMISLVGNLSVLLFLTFSRKYEFspfGAFVSFFAFLST---------------------------LLL------- 104 Aquifex aeolicus
Q9P9P5  33 EWRIPALVGLLAHGGYHFLVILGN-AGAvdmHFFSALSITFFV---------------------------MSGLTILFst 84  Xylella fastidiosa
Q9HXP7  35 LLLLFGLLALVAHAFSLYQQLLTP--AGlvlDFFNAASLIAAA---------------------------VILLTLLAtl 85  Pseudomonas aeruginosa
Q9KUG2  37 TVFISAAIALLFHGWLLSDLILHS--SGqnlSILNVASLISFI---------------------------ISLAMSLAmf 87  Vibrio cholerae
Q9X619  58 MAILSAVIALVCHAVALESRILPGGDSGqnlSLLNVGSLVSLM---------------------------ICTVMTIVas 110 Salmonella enterica s...
Q9K176  36 ELPVLGA-ALTVHGAALLMPVIQD--KIiimGFGYSGSLIVWM---------------------------MLFIYFAGsf 85  Neisseria meningitidi...
P30962   3 LIDLANPTRFLALTARVLPWLA-----------AATVILLAIG---------------------------LYQS-ALA-- 41  Bradyrhizobium diazoe...
P52220   3 IWEYANPVKFMRTSGAILPWVV-----------AGAAACTVTG---------------------------LVWGFLT--- 41  Paracoccus denitrific...
P36180 182 ass----------npfvrISFVCTKSLAELNPVLQDPILAIHPPCIYAGYVASAIGFCLCLSKIINRQQkslkniyifff 251 liverwort
P16645 117 -----------------------EQQSAAFSGQLVSELLVIHITMAILSYGAFSLSFVFSVLYMFQYHLlk--------- 164 Bacillus subtilis sub...
O66467 105 --------------------------IPSKELGFSNPLYALHITSAGFSYAFLIFAGFTSTARLLIERK----------- 147 Aquifex aeolicus
Q9P9P5  85 hvgmgtv--gvvvfplagLLLAVYHGYGHSPSPELGWRVELHACLALLGYATLGIAALLAMMLWFQERAlr--------- 153 Xylella fastidiosa
Q9HXP7  86 ripvenlllllfplgaltTLLAVLIPHGTVEPINEQPGILAHILLSILAYGLLTIAVFQALLLLLQDYRlk--------- 156 Pseudomonas aeruginosa
Q9KUG2  88 ktrlwfllpvaysfsainLSAATFLPGTFITHLESDPKLLLHISLALFSYSTLSIGALYALQLAWLDHKlk--------- 158 Vibrio cholerae
Q9X619 111 rnrgwlllpivyafalinLPLATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQl---------- 180 Salmonella enterica s...
Q9K176  86 fyplrgvqlllypcaalmLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSlh--------- 156 Neisseria meningitidi...
P30962  42 --------------------------PDDYQQGATVKIMFIHVPNAWLSMFVWGVMSIASLGTL---------------- 79  Bradyrhizobium diazoe...
P52220  42 --------------------------PEDYKQGATVKIIFLHVPAALMAINIWLMMLVTSLIWL---------------- 79  Paracoccus denitrific...
P36180 252 pflvkpkkgrrpemagphtrtspysrvpfgslahreqaksvvrktntmyfHFGWTCSANTVVWKQ----IQIWILTCWCF 327 liverwort
P16645 165 -------------------------------------------------kKKWGKWLLRIEDLSKldymAYVLNVIGVPM 195 Bacillus subtilis sub...
O66467 148 --------------------------------------------------LREKKVDFSFAPLKIlkklERVFIIAGFVG 177 Aquifex aeolicus
Q9P9P5 154 -------------------------------------------------qRNVHHWRGALPPLTEleklLFRTITVGFVL 184 Xylella fastidiosa
Q9HXP7 157 -------------------------------------------------hKHPSGLIRNFPPLQTmeslLFGFLWGGWSL 187 Pseudomonas aeruginosa
Q9KUG2 159 -------------------------------------------------sKKVFSINPNLPPLLLverqLFKIILIGNLL 189 Vibrio cholerae
Q9X619 181 -------------------------------------------------kNKKLAFSNEMPPLMSierkMFHITQIGVVL 211 Salmonella enterica s...
Q9K176 157 -------------------------------------------------rRSFSKLAGFLPSLLSleklMFQAMWAGFIL 187 Neisseria meningitidi...
P30962  80 -----------------------------------------------------------VWRHPLadvaAKAAAPIGAAF 100 Bradyrhizobium diazoe...
P52220  80 -----------------------------------------------------------IRRHHVsalaAKAAAPVGAVM 100 Paracoccus denitrific...
P36180 328 LTVGILLGSWWAyhELGWGGWWFWDPVENASFMPWVLATACIHSVIl----PKLNDWTLFLNMVTFLCCILGTFFVRS-- 401 liverwort
P16645 196 LLLSLILGVIWA--YVSLETLYWFDAKVLGSFVVLLLYSYYLYIRLi---kELQGKVAALWNTACFLVLMINYFLLGSl- 269 Bacillus subtilis sub...
O66467 178 LTLTLIFGSLWA--KVYLGTHWVNDPKLLVTLILWLYYGFLAHMFIf---kHFKPSQISYLSILGMFLSLIALLFFR--- 249 Aquifex aeolicus
Q9P9P5 185 LTFTVFTGFLFV--RDFLEQKLL--HKSVLSVLSWVIFGGLLIGRwr---yGWRGIKAVHWTLTAMMFLVLAFFGSKLmi 257 Xylella fastidiosa
Q9HXP7 188 LSLSLLSGWLFV--DNLFAQHLA--HKTILSCFAWVVFAVLLWGRhq---lGWRGHKAIRWTLAGFCLLMLAYFGSKLvr 260 Pseudomonas aeruginosa
Q9KUG2 190 LTGTLLTGFIFV--QDMFAQGKA--HKGILSFVAWIVYSILLWGHyr---kGWRGKKVTWFAVAGATLLTLAYFGSRFvr 262 Vibrio cholerae
Q9X619 212 LTLTLCTGLFYM--HNLFSMENI--DKAVLSIVAWFVYIVLLWGHyh---eGWRGRRVVWFNVAGAVILTLAYFGSRIlq 284 Salmonella enterica s...
Q9K176 188 LTYSVVSGTFFA--EAVFGKPMTFTHKTVFGILSWLIYGGLLLKHsm---tAWRGKKAAVWTIIGFVSLMIAYMGSKFvl 262 Neisseria meningitidi...
P30962 101 TFLALLTGSLWG--RPMWGTYWEWDARLTSVLILFLMYLGLMALWRavddpSRAARAAAVLTLVGAINLPIIKFSVDWw- 177 Bradyrhizobium diazoe...
P52220 101 TLIALITGAIWG--QPMWGTWWEWDPRLTSFLILFLFYLGYMALWEavenpDSAADLTGVLCLVGSVFALLSRYAVNFwn 178 Paracoccus denitrific...
P36180 402 -GLL 404 liverwort
P16645 270 sQFH 273 Bacillus subtilis subsp. subtilis str. 168
O66467 250 ---H 250 Aquifex aeolicus
Q9P9P5 258 eLML 261 Xylella fastidiosa
Q9HXP7 261 eFIL 264 Pseudomonas aeruginosa
Q9KUG2 263 eIIL 266 Vibrio cholerae
Q9X619 285 qFVS 288 Salmonella enterica subsp. enterica serovar Typhimurium
Q9K176 263 eIIL 266 Neisseria meningitidis serogroup B
P30962 178 nTLH 181 Bradyrhizobium diazoefficiens USDA 110
P52220 179 qGLH 182 Paracoccus denitrificans PD1222
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