Conserved Protein Domain Family
KRAB

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pfam01352: KRAB (This model is not part of the current CDD release)
KRAB box
The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B. The A box plays an important role in repression by binding to corepressors, while the B box is thought to enhance this repression brought about by the A box. KRAB-containing proteins are thought to have critical functions in cell proliferation and differentiation, apoptosis and neoplastic transformation.
Statistics
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PSSM-Id: 514199
Aligned: 382 rows
Threshold Bit Score: 48.1838
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8C393          49 PVIFKDVAVYFSQKEWQLLEPAQKDLYKDVMLENYENLISVE 90  house mouse
130_pfamImport   1 GVNFRIVTVDFTQEEEGTLNTAQRALDRDVILEDHRDIVSWE 42 
XP_006142121    44 EMNFKIVTVDFTQEEQGTWNLSQRTLNRGVLLQNHRDLFSWD 85 
KAI2591595      44 GVNFKIVTVDFTREEQGTCNPAQRTLDRDVILENHRDLVSWD 85 
XP_007499150   229 PVTCEDVTVPLSQEEWRCLNSAQRVLYKGIAQEKFRNVDSVG 270
83_pfamImport    1 SVLFEDLAEYFSQEECVSLHPVQRSLSKGATQECFKDVAWLG 42 
XP_003478186    13 PVLFDDLAVYFSQEECVTLHPAQGSHSREATQESFEDVALMG 54 
Q8NHY6         231 LVTIKNLAVDFRQQ----LHPAQKNFCKNGIWENNSDLGSAG 268 human
Q8BGS3         224 MVKIEDMAVSLILEEWGCQNLARRNLNRDSRQMNLGNVFSQG 265 house mouse
XP_001373597   212 LVKIEDMAVSLIQEEWGLLDPAQKDLCNDGRPENYGHVYSLG 253
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