7JSH


Conserved Protein Domain Family
Parvo_NS1

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pfam01057: Parvo_NS1 
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Parvovirus non-structural protein NS1
This family also contains the NS2 protein. Parvoviruses encode two non-structural proteins, NS1 and NS2. The mRNA for NS2 contains the coding sequence for the first 87 amino acids of NS1, then by an alternative splicing mechanism mRNA from a different reading frame, encoding the last 78 amino acids, makes up the full length of the NS2 mRNA. NS1, is the major non-structural protein. It is essential for DNA replication. It is an 83-kDa nuclear phosphoprotein. It has DNA helicase and ATPase activity.
Statistics
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PSSM-Id: 426020
Aligned: 25 rows
Threshold Bit Score: 169.41
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7JSH_A   219 R----------------------SKTSARY--------------MELVGWLVDKGITSEKQWIQEDqasyiSFNAASNSR 262
Q2LD59   317 L----------------------SRKQKIM--------------AEVIQRATDGLLLTYNDLVVHLsdlmlMLEGMPGGS 360 Bovine parvovirus-1
Q65023   281 TdqtdsatsktgtsliwkscatkVTSKKEVanpvqqpskklysaQNTLDALFNVGCFTPEDMIIKQsdkylELSLEPNGP 360 Aleutian mink disea...
Q7TD16   237 EskkhkgsnnqqniqkqssttaiASGHDIVdgeldg--rsesnrETAYYTFVLHKNNCKEDWRYIA-------------- 300 Aedes albopictus C6...
Q993M6     2 Q----------------------TRKEVSI--------------KTTLKELVHKRVTSPEDWMMMQpdsyiEMMAQPGGE 45  Autonomous rat parv...
Q00683   225 K--------------------------SKF--------------LGTIEWLSDLGIVTEDAWIRRDirsymQLLTLTHGD 264 Human herpesvirus 6...
Q9DW64    55 E-----------------------SPVDKL--------------PKMVATLIEYGIVNENTWCLEEfesylEVQSDPVKR 97  Rat cytomegalovirus...
Q89621     1 M----------------------SRESERY--------------WTLVHALIDRGVVSREQWQMVDpaqyqFYHRSKQRG 44  Fowl aviadenovirus 1
Q9YYR9     1 M----------------------SGSRDRY--------------WSLVESLINRGIVTRQQWYFNDrseygYYTKRYRGA 44  Fowl aviadenovirus 8
AMB36744   1 M------------------------ASDRY--------------WDLVNSLINRGIVTREQWQSADlaeyrRYSKGYVRG 42  Fowl aviadenovirus C
7JSH_A   263 SQIKAALDNAGKIMSLTKTAPDYLVGQQPV--------E--DISSNRIYKILELNGYDPQYAASVFLGWATKKFGKRNTI 332
Q2LD59   361 KTAEQLLTMIHIKLCAKYNAYEFMLMKTPAtqnmnpgaPhyDCQGNLVFKLLNLQGYNPWQVGHWLVMMLSKKTGKRNST 440 Bovine parvovirus-1
Q65023   361 QKINTLLHMNQVKTSTMMTAFDCIIKFNEE------------EDDKPLLATIKDMGLNEQYLKKVLCTILTKQGGKRGCI 428 Aleutian mink disea...
Q7TD16   301 --TTRAKQAPSFITFDHGNHIHILFSSSNTg-------GnsTRVRTRITKFLSATSAGSAEAT----ITFSKVKFLRNYI 367 Aedes albopictus C6...
Q993M6    46 NLLKNTLEICTLTLARTKTAFDLILEKAETsk-----lAnfSMASTRTCRIFAEHGWNYIKVCHAICCVLNRQGGKRNTV 120 Autonomous rat parv...
Q00683   265 VLIHRALSIAKKRIRATRKAIDFIAHIDTDf----------QIYENPVYQLFCLQSFDPILAGTILYQWLSHRGGKKNTV 334 Human herpesvirus 6...
Q9DW64    98 ARARKAISVARRYLGTRESPLRYVIKGDGTt-------VarDICDNPTYRLIRTHNLNPRVVAGVLWAFLRSRHTPKNCL 170 Rat cytomegalovirus...
Q89621    45 FKVRHILRDVIRHMCWSRTLLDYMSSASTP--------SpdDVLRNPLYQLLLCNGYNPAVVGTALIRWAGHQ-SNRNTV 115 Fowl aviadenovirus 1
Q9YYR9    45 MKLSNLFRDVRRHMFWTKCLADYMLTPETDf---------lQIEENPFYSVFSKNGYDPALVGSMLLAWAARQ-SKRNTV 114 Fowl aviadenovirus 8
AMB36744  43 FSVRKVLRDVIKHMCWTKVLGDYLVCPVVCq---------dDIHLNPFYVILMKNGYNPRVVGTILHKWSMLT-SNKNTV 112 Fowl aviadenovirus C
7JSH_A   333 WLF-----GPATTGKTNIAEAIAHTVPFYGCv--NWTNENFPFNDCVDKMVI-WWEEGKMTAKVVESAKAILGGSKVRVD 404
Q2LD59   441 LFY-----GPASTGKTNLAKAICHAVGLYGCv--NHNNKQFPFNDAPNKMIL-WWEECIMTTDYVEAAKCVLGGTHVRVD 512 Bovine parvovirus-1
Q65023   429 WFY-----GPGGTGKTLLASLICKATVNYGMv--TTSNPNFPWTDCGNRNII-WAEECGNLGNWVEDFKAITGGGDVKVD 500 Aleutian mink disea...
Q7TD16   368 LYCirygiETVNIYGNKIQQQLTEAMDTFKVl-fENRDPNDVILDAGCKL---YHEEKKDYQQKRCGQRKQQNLTDIILD 443 Aedes albopictus C6...
Q993M6   121 LFH-----GPASTGKSIIAQAIAQAVGNVGCy--NAANVNFPFNDCTNKNLI-WVEEAGNFGQQVNQFKAICSGQTIRID 192 Autonomous rat parv...
Q00683   335 SFI-----GPPGCGKSMLTGAILENIPLHGIlhgSLNTKNL---RAYGQVLVlWWKDISINFDNFNIIKSLLGGQKIIFP 406 Human herpesvirus 6...
Q9DW64   171 WLY-----GEADTGALDLANAIMACVPLTGIl--VGTPTQEDLAACVDKLLI-WWRDPPENVLVSDTYRSLLAGMLLKVr 242 Rat cytomegalovirus...
Q89621   116 WIR-----GTPMSGAPYLAQAIAYCSPLVGSv--DWRNKSNPFEGCPDSLVF-WWDGGYVYDCCVGLVKQVFRGEHVILP 187 Fowl aviadenovirus 1
Q9YYR9   115 WIR-----GAPVTGAPYLAEAIAYCCPLMTCv--DWRNKQNPFEKGFESLLF-WWDGGHVPHRCVALCRQVFRGENVMFP 186 Fowl aviadenovirus 8
AMB36744 113 WVW-----GGAETGGPYLAEAIAYTSPVVGCv--DWRNRANPFARNYNCLVY-WLDGGLFPESAIGLCEQVLRGEGTMVE 184 Fowl aviadenovirus C
7JSH_A   405 qkcks-----saqiDPTPVIVTSNTNMCAV-IDGNSTTFEHQQP------------LQDRMFKFELTRRLDHD----FGK 462
Q2LD59   513 vkhkd-----srelPQIPVLLSSNHDVYTV-VGGNATFGVHAAP------------LKERITQMNFMKQLPNT----FGE 570 Bovine parvovirus-1
Q65023   501 tknkq-----pqsiKGC-VIVTSNTNITKV-TVGCVETNAHAEP------------LKQRMIKIRCMKTINPK-----TK 556 Aleutian mink disea...
Q7TD16   444 kikdk----kittaQQWENIIEPEFKIQLM-KEFGLNVDSYVQRivriertriqqlIKSKTLTEIMVEILNEEyiknFTP 518 Aedes albopictus C6...
Q993M6   193 qkgkg-----skqiEPTPVIMTTNENITVV-RIGCEERPEHTQP------------IRDRMLNIHLTRTLPGD----FGL 250 Autonomous rat parv...
Q00683   407 inend-----hvqiGPCPIIATSCVDIRSM-VHSN----LHKIN------------LSQRVYNFTFDKVIPRN----FPV 460 Human herpesvirus 6...
Q9DW64   243 akev------tkslRKTPVLVTTGRELVRT-EDGS----PNAVH------------LKSKMWKVCLAGTVSQD----MLG 295 Rat cytomegalovirus...
Q89621   188 peglrgp-npcselFRTPVLMYSQADICMTrLRSGELSAEHAVG------------LRDCMYLIRLTEDFDCA-----GG 249 Fowl aviadenovirus 1
Q9YYR9   187 redgq-----mselVRTPVLLYSEHDACRTlVKWGVFSDEFSDG------------LRNSMYCLDLSAPMEGA-----QC 244 Fowl aviadenovirus 8
AMB36744 185 veegatgerrwreiNRTPVLISTSHDVTLTyVKYGQTCKDHTNS------------LRSAMYVLRLTERVEPG-----FV 247 Fowl aviadenovirus C
7JSH_A   463 VTKQEVKDFF-RWAKD--------HVVEVEHEFY 487
Q2LD59   571 ITPGMISNWL-SHCAHihqehlslEGFAIKWDVQ 603 Bovine parvovirus-1
Q65023   557 ITPGMLKRWLnTWDRQ---------PIQLSHEMP 581 Aleutian mink disease virus
Q7TD16   519 GEDNSKLQNIiQWIEY------------MFKENN 540 Aedes albopictus C6/36 cell densovirus
Q993M6   251 VDKHEWPLIC-AWLVK--------NGYQSTMACY 275 Autonomous rat parvovirus RV-Y
Q00683   461 IQKDDINQFL-FWARN--------RSINCFIDYT 485 Human herpesvirus 6 (strain Uganda-1102)
Q9DW64   296 LRSRDVREFL-QWLEM--------IEMGETASMN 320 Rat cytomegalovirus Maastricht
Q89621   250 ISCADVKQFV-AWSREh------pGEVRETHELK 276 Fowl aviadenovirus 1
Q9YYR9   245 VTCADARAFF-TWAYP----------RRMDFDCF 267 Fowl aviadenovirus 8
AMB36744 248 ITCNDARKFV-TWASN---------NPHINAEDM 271 Fowl aviadenovirus C
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