Conserved Protein Domain Family
Sox_C_TAD

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pfam12067: Sox_C_TAD (this model, PSSM-Id:288887 is obsolete and has been replaced by 463454)
Sox C-terminal transactivation domain
This domain is found at the C-terminus of the Sox family of transcription factors. It is found associated with pfam00505. It binds to the Armadillo repeats (pfam00514) in Catenin beta-1 (CTNNB1), which is involved in transcriptional regulation. It functions as a transactivating domain (TAD).
Statistics
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PSSM-Id: 288887
Aligned: 39 rows
Threshold Bit Score: 107.018
Created: 15-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P43680       187 SARSFRELPTLGA--EFD--GLGLPTPERSPLDGLEPG--EASFFPPPlAPEDcaLRAFRA---------------PYAP 245 house mouse
B3DLD3       169 NLSHFRDLHPLGGsgDLE--SYGLPTPEMSPLDVVEPS--EPAFFPPH-MREEadPGPFRTyqhg--------vdfGQEK 235 western clawed ...
XP_010720788 136 PLNHFRELHSMGS--DIE--NYGLPTPEMSPLDVLEQT--EPAFFPPH-MQEDcgMMPFRGy-------------hHHHP 195 turkey
XP_012409532 135 PLNHFRELHPLGA--ELD--NFGLPTPEMSPLDVLEPS--EPAFFPPH-MQDDcsLLGFRSp-------------yPPQL 194 Tasmanian devil
XP_003220734 248 PLNHFRELRSVGS--DME--NYGLPTPEMSPLDVLEQT--EPAFFPPH-MQDDcnVMPFRGyhhh--------pppPPPP 312 green anole
XP_006010839 220 SLDHFRELRSMGS--EYE--NYGLPTPEMSPLDVLDQP--DPVFFPPH-MQEDcsIMAFRTyhh---------hhhHHHH 283 coelacanth
XP_006639742 252 PLNHFRDLHSVGS--EFE--SYGLPTPEMSPLDVLEEG--DPVFFPPH-MHDDvnLVPWINyhhnphhhhhhhlppPQKS 324 spotted gar
XP_001337702 207 PLGHFRDLHPSGAp-ELE--SFGLPTPEMSPLDVLEEGggDSVFFPPH-MQEDvgLSSWINy-------------hQHPN 269 zebrafish
AAQ18512     229 SHGHFRDLQAVPG--HLEleSYGLPTPEMSPLDILEEGagESVFFPQH-MQEEagMVGWSSy-------------hQHHQ 292 torafugu
XP_011617417 313 tysqssgmaagpsistsmnsspgrssrvdprlssvepgissvtsalagslssrlspASAHHialr--------spvKFPA 384 torafugu
P43680       246 E-----Lard---------------------------------psfC-YGAPLaeal-rtapP-AAPl----------aG 274 house mouse
B3DLD3       236 T-----Lreislp----------------------------yssspS-HMGGFlr------tP-TAS------------A 262 western clawed ...
XP_010720788 196 Q-----Mefpqekclg----------------------rdvavpyaQ-PPAHLada---mrtP-HPS------------G 231 turkey
XP_012409532 195 D-----Yapdkalard----------------------lggpygqpP-APAHLaeal-rtapP-PPP------------G 232 Tasmanian devil
XP_003220734 313 Q-----Mefspekalg----------------------rnlsmgypPnTSAHLaea---mrtS-HPS------------G 349 green anole
XP_006010839 284 Q-----Mefhqekpqvp--------------------ggemsipypQ-TPSNMtda---mrtP-HPS------------S 321 coelacanth
XP_006639742 325 P-----Eshqekrhipg--------------------pegthmsfsQ-NPVGVaea---vkgS-HTS------------S 362 spotted gar
XP_001337702 270 H-----QpghhphhnshnlqhshphlnqksplaclplqekclvvesP-NPGGLypn---mtlPeSSK------------A 328 zebrafish
AAQ18512     293 LhhnqqYsqaplsestss------------------vsfshlpaslP-QPAKSqqt---shhS-AAP------------A 337 torafugu
XP_011617417 385 P-----Lse---------------------------------------stSSVsfshlpaslP-QPAksqqtshhsaapA 419 torafugu
P43680       275 LYYGTLGTPGpfPNp-----------L-----------------------SPPPES--------PSLEGTEQLEPtA--- 309 house mouse
B3DLD3       263 FYYNPHGGSPacTPlg---------qL-----------------------SPPPEA--------PALEAMDHLGP-A--- 298 western clawed ...
XP_010720788 232 LYYNQMCSGTqsgls------ahlgqL-----------------------SPPPEA--------HHMESVDHLNQ-T--- 270 turkey
XP_012409532 233 LYYSQLCGPSgpAGpranglsphlgqL-----------------------SPPPEV--------HHLDGVEQLSS-A--- 277 Tasmanian devil
XP_003220734 350 MYYNQICa----GAtngls--ahlgqL-----------------------SPPPES--------HPLDGGEHMNP-S--- 388 green anole
XP_006010839 322 MYYNQMCPGPqggps------aplgqL-----------------------SPPPEA--------HHLDNVDHLNQ-T--- 360 coelacanth
XP_006639742 363 VYYNQVYSGPqggft------ahlgqL-----------------------SPPPEA--------PTLDNVEQLNH-S--- 401 spotted gar
XP_001337702 329 GYYGQIYGSSqpQPafts----hlgqL-----------------------SPPPETsavaqvapPSLDAVDQLGPsA--- 378 zebrafish
AAQ18512     338 GYFSYASSTPnsTYhmsc----hlgqLspppetppsscssssiiqstfpnSIPLEH--------LNPETTSHLNS-Ss-- 402 torafugu
XP_011617417 420 GYFSYASSTPnsTYhmsc----hlgqL-----------------------SPPPETp-------PSSCSSSSIIQsTfpn 465 torafugu
P43680       310 --------------------DLWADVDLTEFDQYLNCSRTRPdaTTLPYhval-------aklGPRAMSCPEe-SSLI-S 360 house mouse
B3DLD3       299 --------------------ELWGDFDRNEFDQYLNMSRTQG--PGYPFpms--------klgAPRTIPCEE--SSLI-S 345 western clawed ...
XP_010720788 271 --------------------DLWTDVDRNEFDQYLNMSRTRPeaSGLPYhvsl-------skvTPRSISCEe--SSLI-S 320 turkey
XP_012409532 278 --------------------ELWTDVDRNEFDQYLNTSRTRPevPGLAYhvsl-------aklTPRTLSCEe--SSLI-S 327 Tasmanian devil
XP_003220734 389 --------------------ELWTEVDRNEFDQYLNMSRTRPdpPGFAYhvsm-------sklTPRSLSCEe--SSLI-S 438 green anole
XP_006010839 361 --------------------ELWTDVDRTEFDQYLNMSRTRPeaPGQSYhvsr-------skvTPRGFSCEe--SSLI-S 410 coelacanth
XP_006639742 402 --------------------EFWTEVDRNEFDQYLNMSRTRLegPGQHYtasm-------skvPPRHISCED---SPLiS 451 spotted gar
XP_001337702 379 --------------------EFWGEVDRIEFDQYLSASRTR----------------------VSRSAPCEe--SSALiS 414 zebrafish
AAQ18512     403 -------------------gEFWSDVDRHEFDQYVNAGRIREeaLGRGVgvlkgpsgrgsssvMSAAPSCDEggSSLI-S 462 torafugu
XP_011617417 466 siplehlnpettshlnsssgEFWSDVDRHEFDQYVNAGRIREeaLGRGVgvlkgpsgrgsssvmsaAPSCDEggSSLI-S 544 torafugu
P43680       361 ALSDAsSAVYYSACI 375 house mouse
B3DLD3       346 ALSDAsTAMYYTPCI 360 western clawed frog
XP_010720788 321 ALSDAsSAVYYSPCI 335 turkey
XP_012409532 328 ALSDAsSAVYYSPCI 342 Tasmanian devil
XP_003220734 439 ALSDAsSAVYYSTCI 453 green anole
XP_006010839 411 ALSDAsSAVYYSTCI 425 coelacanth
XP_006639742 452 ALSDAsSAVYYSACI 466 spotted gar
XP_001337702 415 ALSDAsSAVYYSACI 429 zebrafish
AAQ18512     463 ALSDAsSAVYYNTCI 477 torafugu
XP_011617417 545 ALSDAsSAVYYNTCI 559 torafugu
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