Conserved Protein Domain Family
Sox17_18_mid

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pfam12067: Sox17_18_mid (this model, PSSM-Id:463454 is obsolete and has been replaced by 463454)
Sox 17/18 central domain
This is the central region of eukaryotic SOX17 and 18 transcription factor proteins. It lies just downstream of the HMG-box family, pfam00505, and is followed by a C-terminal domain.
Statistics
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PSSM-Id: 463454
Aligned: 30 rows
Threshold Bit Score: 58.8191
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4RR75       180 FRDPAGSNS--SFDtyPYGLPTpPEMSPLDAMDHEhvpPAYYSTSasssvscsssvsCPEDvHHQNH--TH 246 spotted green pufferfish
XP_005993498 188 FREHNAMAG--SFD--NYTLLT-PETSPFDAVDTD---VVFFSSH------------VQES-RPMVPy-GY 236
XP_006633984 195 YRESQNMGA--HYE--SYNLPT-PDTSPLDVVEND---SVYFSPHp----------hSQED-CHMMPayAY 246
XP_010779996 196 YRDAQGLGGp-SYE--SYSLPT-PDTSPLDAVESD---LMFFPSH------------SQED-CHMMPayAY 246
CAF89042      95 YRDAQALGGp-SYE--AYSLPT-PDTSPLDAVEPD---SMFFQPH------------SQED-CHMMPtyPY 145
XP_003439290 195 YRDAQALGGp-SYE--TYSLPT-PDTSPLDAVESE---SMFFPPH------------SQED-CHMMPaySY 245
B3DLD3       173 FRDLHPLGGsgDLE--SYGLPT-PEMSPLDVVEPSe--PAFFPPH------------MREE-ADPGPfrTY 225 tropical clawed frog
XP_006010839 224 FRELRSMGs--EYE--NYGLPT-PEMSPLDVLDQPd--PVFFPPH------------MQED-CSIMAfrTY 274
XP_003220734 252 FRELRSVGs--DME--NYGLPT-PEMSPLDVLEQTe--PAFFPPH------------MQDD-CNVMPfrGY 302
XP_019477751  93 FRELHSMGs--DIE--NYGLPT-PEMSPLDVLEQTe--PAFFPPH------------MQED-CGMMPfrGY 143
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