Conserved Protein Domain Family
PLAT_RAB6IP1

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cd01757: PLAT_RAB6IP1 
PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Statistics
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PSSM-Id: 238855
Aligned: 6 rows
Threshold Bit Score: 165.019
Created: 21-Sep-2004
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_997809  973 IPYRAVIIPikklsnamttsNPWLCVSGelGDSGILQIt--KNILEMTFdcqnLGKLTTVQLGHDNSgllakWLVDCVMV 1050 zebrafish
Q6IQ26     954 IPYHILIVPskklggsmftaNPWICISGelGETQIMQIp--RNVLEMTFecqnLGKLTTVQIGHDNSglyakWLVEYVMV 1031 human
NP_728624 1095 LPYRVVIFPsrkygsyhtssNVWIMVSGtmNETQRVPVp--KGSLEFIFhyknLGLLTTMRIGHDNSgpshkWLVEQVVM 1172 fruit fly
T15824     911 MDYQVVIVTgsgr---gaipAIWVTVEGslCSTPPIMLk--PNTPLFKFdhknLGILSTLRIGHQQSekpvqWFLEYVLV 985  nematode
XP_420981 1175 IPYHILIVPskklggsmftaNPWICISGelGETGVLQIp--RNILEMTFecqnLGKLTTVQIGHDNSglyakWLVEYVMC 1252 chicken
XP_700827    1 MLWGVGRTTsqqvegclllqNSMAFWEW--DKAPPPPVkppKKSFSACClcqnLGKLTTVQLGHDNSgllakWLVDCVMV 78   zebrafish
NP_997809 1051 RNEitg------------------htYKFPCGRWLGKgvdd------------------gslERVLI 1081 zebrafish
Q6IQ26    1032 RNEitg------------------htYKFPCGRWLGKgmdd------------------gslERILV 1062 human
NP_728624 1173 RNEvtg------------------htYKFPCGRWLGRgvdd------------------dstERLLV 1203 fruit fly
T15824     986 RNEitg------------------qtYKFPCSKKFGEdrwfgn-------------geditlERMLV 1021 nematode
XP_420981 1253 RTPplqqspsiirrlvtispnnkpklNTGQIQEAIGEavngivkhfhkpekergsltlllcgESGLV 1319 chicken
XP_700827   79 RNEitg------------------htYKYGLFQPLNTivspvaggw-------etgvddgslERVLI 120  zebrafish
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