4Q58,3F7P,4Q57,1MB8,1SH5


Conserved Protein Domain Family
CH_PLEC_rpt1

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cd21235: CH_PLEC_rpt1 
first calponin homology (CH) domain found in plectin and similar proteins
Plectin, also called PCN, PLTN, hemidesmosomal protein 1 (HD1), or plectin-1, is a structural component of muscle. It interlinks intermediate filaments with microtubules and microfilaments, and anchors intermediate filaments to desmosomes or hemidesmosomes. It can also bind muscle proteins such as actin to membrane complexes in muscle. Plectin contains two copies of the CH domain. This model corresponds to the first CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409084
Aligned: 11 rows
Threshold Bit Score: 221.052
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:integrin binding site [polypeptide binding site]
Evidence:
  • Structure:4Q58; Homo sapiens plectin in complex with integrin beta 4 through its actin-binding domain, contacts at 4A.
  • Comment:The interaction between the integrin alpha6beta4 and plectin is essential for the assembly and stability of hemidesmosomes, which are junctional adhesion complexes that anchor epithelial cells to the basement membrane.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #                               #  #  #                                  # #    
4Q58_A          1 DERDRVQKKTFTKWVNKHLIK-----AQRHISDLYEDLRDGHNLISLLEVLSGDSL------------PREKGRMRFHKL 63   human
3F7P_A         68 DERDRVQKKTFTKWVNKHLIK-----AQRHISDLYEDLRDGHNLISLLEVLSGDSL------------PREKGRMRFHKL 130  human
4Q57_B         19 DERDRVQKKTFTKWVNKHLIK-----AQRHISDLYEDLRDGHNLISLLEVLSGDSL------------PREKGRMRFHKL 81   house mouse
1MB8_A         10 DERDRVQKKTFTKWVNKHLIKhwraeAQRHISDLYEDLRDGHNLISLLEVLSGDSL------------PREKGRMRFHKL 77   human
1SH5_A          7 DERDRVQKKTFTKWVNKHLIKhwraeAQRHISDLYEDLRDGHNLISLLEVLSGDSL------------PREKGRMRFHKL 74   house mouse
Q15149        175 DERDRVQKKTFTKWVNKHLIK-----AQRHISDLYEDLRDGHNLISLLEVLSGDSL------------PREKGRMRFHKL 237  human
NP_001093502   39 DERDRVQKKTFTKWVNKHLVK-----AQRHITDLYEDLRDGHNLISLLEVLSGETL------------PREKGRMRFHKL 101  zebrafish
OCT77335       43 DERDRVQKKTFTKWVNKHLIK-----AQRHVNDLYEDLRDGHNLISLLEVLSGETL------------PREKGRMRFHKL 105  African clawe...
XP_014346978   63 DERDRVQKKTFTKWVNKHLIKhwraeAQRHVSDLYEDLRDGHNLISLLEVLSGETLprerdvvrnlrlPREKGRMRFHKL 142  coelacanth
XP_007893325  103 DERDRVQKKTFTKWVNKHLMKhwraeAQQSVDDLYEDLRDGHNLISLLEVLSGDSLprerdvmknvrlPREKGRMRFHKL 182  elephant shark
KYO20025       39 DERDRVQKKTFTKWVNKHLIK-----AQRHVNDLYEDLRDGHNLISLLEVLSGDTL------------PREKGRMRFHKL 101  American alli...
Feature 1                             # ##  #####                          
4Q58_A         64 QNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 119  human
3F7P_A        131 QNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 186  human
4Q57_B         82 QNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 137  house mouse
1MB8_A         78 QNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 133  human
1SH5_A         75 QNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 130  house mouse
Q15149        238 QNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 293  human
NP_001093502  102 QNVQIALDFLKHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVNGQSD 157  zebrafish
OCT77335      106 QNVQIALDFLKLRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 161  African clawed frog
XP_014346978  143 QNVQIALDFLKHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVTGQSE 198  coelacanth
XP_007893325  183 QNVGIALEYLKHRQVRLVNIRNDDIADGNPKLTLGLIWTIILHFQISD-IQVSGQSE 238  elephant shark
KYO20025      102 QNVQIALDYLKHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQVGVgAMYCGQRR 158  American alligator

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