2JV9,2D87


Conserved Protein Domain Family
CH_SMTN-like

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cd21200: CH_SMTN-like 
calponin homology (CH) domain found in the smoothelin family
The smoothelin family includes smoothelin and smoothelin-like proteins. Smoothelins are actin-binding cytoskeletal proteins that are abundantly expressed in healthy visceral (smoothelin-A) and vascular (smoothelin-B) smooth muscle. SMTNL1, also called calponin homology-associated smooth muscle protein (CHASM), plays a role in the regulation of contractile properties of both striated and smooth muscles. It can bind to calmodulin and tropomyosin. When it is unphosphorylated, SMTNL1 may inhibit myosin dephosphorylation. SMTNL2 is highly expressed in skeletal muscle and could be associated with differentiating myocytes. Members of this family contain a single copy of the CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409049
Aligned: 17 rows
Threshold Bit Score: 201.032
Created: 8-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #   #                                                   # ##  ## #        #####
2JV9_A         4 GSKNMLLEWCRAMTRnye--hvDIQNFSSSWSSGMAFCALIHKFFPEAFDyaeldpaKRRHNFTLAFSTAEKLAdCAQLL 81  house mouse
NP_996359    103 TVKDQLLQWCKHKTQeye--nvQINNFSSSWSDGLAFCALIHHFLPDAFDyttltkqTRRHNFELAFSVADEKAgIAPLL 180 fruit fly
NP_001033371 114 SIKDALLRWIQNRVAgyp--nvNVTNFSSSWADGMAFCALIHRFAPNSFDfskldpnNRRYNFDLAFKVAEDNG-IFPLL 190 Caenorhabditis ...
RWS04861     283 DVKEMLLRWCKNKTSeyp--nvDITNFSSSWADGLAFCALIHHFFPDAFDyssldakNRRKNFELAFKTAEEKAdIAPLL 360 Dinothrombium t...
EFX73618      11 GIKDFLLQWCQSRTRgyk--nvQIENFSSSWNDGLAFCALIHHFYPDAFDynqleakNKRYNFTLAFKTADEKAgIAPLL 88  common water flea
PVD31200     724 AIKQMLLDWCKAMTReye--nvEVTNFSTCWNDGMAFCALIHHFFPDAFDfsqldpkNRRYNFELAFNTAEKLAdISPLL 801 Pomacea canalic...
XP_013412541 132 AIKQMLLSWTQAMTKeyanygvNITNFSSSWNDGMAFCALIHHFFPDAFDftnldskNRRANFTLAFDTAEQKAdIAPLL 211 Lingula anatina
XP_002591867 132 AVKDMLLRWCRSKTSgyd--hvEISNFSTSWNDGMAFCALIHHFFPDAFDyesldpkNKGHNFKLAFDTAEQKAdVPQLL 209 Florida lancelet
VDL45263      27 SAKEIMLHWCQAITRgyp--hvDVKNFGSSWADGMAFCALIHHFYPDAFDfstlkpeNRRANFDLAFKTAEELGnVAPLL 104 Hymenolepis dim...
XP_006817118 803 TIKTMLLEWCKARTAgye--ncEITNFSSSWANGMAFCALIHHYFPDAFDyrvlnpkNRRRNFDLAFNTAETKAdIMPLL 880 Saccoglossus ko...
Feature 1        ####        # ## ##  ##  #   
2JV9_A        82 EVDDMVRLa-vPDSKCVYTYIQELYRSLV 109 house mouse
NP_996359    181 DVEDMVEMs-rPDWKCVFVYVQSIYRRFR 208 fruit fly
NP_001033371 191 EVDDMIMMgdrPDWKCVFTYVQSFYKQFR 219 Caenorhabditis elegans
RWS04861     361 DVEDMILMknrPDWKCVFTYVQSMYRHLR 389 Dinothrombium tinctorium
EFX73618      89 DVEDMVLMa-rPDWKCVFTYVQSFYRRFK 116 common water flea
PVD31200     802 DVEDMVKMk-nPDWKCVFTYVQSIYRHLR 829 Pomacea canaliculata
XP_013412541 212 DVEDMVRMe-nPDWKCVFTYIQSVYKGLN 239 Lingula anatina
XP_002591867 210 DVEDMVRMk-cPDWKCVFTYLQCAYRQLH 237 Florida lancelet
VDL45263     105 DTEDMLRMk-vPDWKCIFTQIQLYYRRFQ 132 Hymenolepis diminuta
XP_006817118 881 ETEDMLLMgnkPDWKCVFTYVQSLYRHLQ 909 Saccoglossus kowalevskii

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