6Q0R,6PAI,6Q0V,6Q0W,6SJ7,6UD7,6UE5


Conserved Protein Domain Family
DCAF15-NTD

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cd20917: DCAF15-NTD 
N-terminal domain of DDB1- and CUL4-associated factor 15
This model represents the N-terminal domain of DCAF15 (DDB1- and CUL4-associated factor 15), the cullin RING ligase substrate receptor/adaptor that forms a complex with CUL4A or CUL4B, as part of the Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ubiquitin ligase that is responsible for the proteasome degradation of certain proteins. Aryl sulfonamide anticancer agents such as indisulam, tasisulam, E7820, and chloroquinoxaline have been shown to recruit the essential mRNA-splicing factor RBM39 to DCAF15. These agents appear to promote binding of DCAF15 to the RNA-recognition motif (RRM) of RBM39, which suggests that derivatives of the aryl-sulfonamides may be used to target other RRM-containing proteins. Cell proliferation is inhibited by these aryl sulfonamides by causing degradation of RBM39, which leads to aberrant processing of pre-mRNA in hundreds of genes, primarily reflected by intron retention and exon skipping, thus collectively referred to as splicing inhibitor sulfonamides, or SPLAMs.
Links
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Statistics
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PSSM-Id: 411024
Aligned: 78 rows
Threshold Bit Score: 96.2337
Created: 17-Aug-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:C C C HClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
6Q0R_B        51 HVLKQLERVKIsgq---------------lsPRLFRk-----lPPRVCVSl-------KNIVDedfl-yagHIFLGFSKC 102 human
6PAI_C        41 HVLKQLERVKIsgq---------------lsPRLFRk-----lPPRVCVSl-------KNIVDedfl-yagHIFLGFSKC 92  human
XP_001417033  21 TVQSRLARREFtsas------------gakpEQIFRs-----iPPRLTIPi-------ERVIDdark-mlsCVLLGFTAD 75  Ostreococcus lu...
XP_003055373  13 SAFARLRARELera--------------npgDKIFSa-----iPGRLATPv-------ESLLDgtss-llrCVVLGFTAD 65  Micromonas pusi...
XP_019857646   2 ALLRFLRDRQEsinice---------htrlqWKVFKql----vRPRCIPLgsvlgdsgRELLEd-------HVLIGFSYY 61  Amphimedon quee...
PRP76383       5 NVIHKLEYARLrghrpnmiy--sskmenslkSNFFEt-----aPPHAIASl-------DEIIDdrge-lrtCIILGFTRD 69  Planoprotosteli...
PSC76438      13 PLPLRLEGLQRt-------------------GRLCSgppfaavPASCQTPi-------ETLLDaage-lksAVLLGFTRD 65  Micractinium co...
VDK34970       2 DLIQALFRREIfg----------------trLPIFP-------SLRPICL--------WDILPmal---cdEVFLGFSAD 47  Taenia asiatica
RWS13400      16 SLTRVLCERQIdge---------------nwRKSFIe-----nIVKREYSl-------QSIVPnee--vlsHVFLGFTQD 66  Dinothrombium t...
XP_004344537  50 GSERRRRRRQSellrrlsgpatsltskrllaARLFPr-----pLPSANVPl-------RAIHDaegqivqgCVLLGFSGD 117 Capsaspora owcz...
Feature 1                                                                                        
6Q0R_B       103 GRYVLSYTSSSGDdd----------fSFYIYHLYWWEFNvh---sKLKLVRQVRL--------------FQDEEIYs--- 152 human
6PAI_C        93 GRYVLSYTSSSGDdd----------fSFYIYHLYWWEFNvh---sKLKLVRQVRL--------------FQDEEIYs--- 142 human
XP_001417033  76 GDHLVSYSAEGGEnf---------sfELQIWKFQPGARArl--laTTPLFESDMGdfgrgm--rglsedFGGAFADapt- 141 Ostreococcus lu...
XP_003055373  66 GDHLLSYASSDGEh------------SLQVWGFRLGEPAtliattPLFQTAESPGsdrlgrgddgesalLGDVGFEds-- 131 Micromonas pusi...
XP_019857646  62 GPYLISYKPSGPF-------------NDREFSLHWWLVDlg---qPLKLVKSCNL--------------FEGFSFGtidt 111 Amphimedon quee...
PRP76383      70 GNHLISYSSTTDNsgahh----ffseEEQHYFLQIWSFKlk---nKSKKISEHPL--------------FGGAAIStrh- 127 Planoprotosteli...
PSC76438      66 GCHLVSYTVHPVAaa----------dGVDGYSLQLWSFHqg---qRCRRLWSVPL--------------FRTPTYLeale 118 Micractinium co...
VDK34970      48 GRFLVSYVFRSNAfrla-----fwlvPGDEGSPNSWLSK------PFAVFSTSMStn----------qiHDQVGVRf--- 103 Taenia asiatica
RWS13400      67 GQYLLSYCFESQLm------------FIYIWNFNYHKPLtl--laKHSVFSGSRLvd----------dlYESTGVYiyqw 122 Dinothrombium t...
XP_004344537 118 GRFMLSYMSEVAParlqssfsffesvTLFTYSFVTWRFDph---qPLACHSKTPL--------------FRGTAHK---- 176 Capsaspora owcz...
Feature 1                                                                                  #  #  
6Q0R_B       153 ---------DLYLTVCEWpsd--asKVIVFGFNTRsangmlmnmmmmsdenHRDIYVSTVAVppp-------grCAACQD 214 human
6PAI_C       143 ---------DLYLTVCEWpsd--asKVIVFGFNTRsangmlmnmmmmsdenHRDIYVSTVAVppp-------grCAACQD 204 human
XP_001417033 142 -------eaNVRVHVCESwd---rsTLVVHGEARRhggedg----dgrgriAKKCCVTVLPS------------PASVKP 195 Ostreococcus lu...
XP_003055373 132 -------tsSLRITACESpd---asVLVIHGEPTAerefgs-----seapmARRCFITAMPSp-----------CARGRA 185 Micromonas pusi...
XP_019857646 112 d----lritELKLCVCQKde----eNVFVFGYEDKdd------------seAKDFYISILSP------------PPSNPT 159 Amphimedon quee...
PRP76383     128 -------gsGLRLTIMEDae---qnLFLIHGCHNVredd---------rstSEDHHITIVPSp----------iILFGHV 178 Planoprotosteli...
PSC76438     119 deeefmggdDMLLTVAEApd---ssLLVVHGRSADpteas-------srdhKLPNFLTLIPGplha-----gaaQLKPLH 183 Micractinium co...
VDK34970     104 ---------LQSTSDTQL-------FVLIYSLGID----------------SISIVWGTMPEp----------nCTDCRQ 141 Taenia asiatica
RWS13400     123 p---sndkhILVLTIPEHpfpsvinLIVIYFDQKQsy-------------vLTPGIITYGVVgwghrhqffdqrVNKCFE 186 Dinothrombium t...
XP_004344537 177 ---------TLLLQVAESpc---grRYVITGFEQEhaad---------glaCRNCYMSIVSH------------TPDEQP 223 Capsaspora owcz...
Feature 1                                                      #    #                            
6Q0R_B       215 asrah----------------------------------pgdpNAQCLr--HGFMLHTKYQVv------yPFPTFQ---- 248 human
6PAI_C       205 asrah----------------------------------pgdpNAQCLr--HGFMLHTKYQVv------yPFPTFQ---- 238 human
XP_001417033 196 gtaiaathmsyvsaalspfhpswsgvtpaatpqddalelgdegEDTCIg--DPYAFNANEMS--------PRRKLRk--- 262 Ostreococcus lu...
XP_003055373 186 aaaaawggrrrg-------------------dgdgdrdsdsdaSSRRTs-wATAATHASYLSt-------SAAPFA---- 234 Micromonas pusi...
XP_019857646 160 -------------------------------------------ELNRDq--ASPSVHLKYQAl-------PPYPLFd--- 184 Amphimedon quee...
PRP76383     179 k------------------------------------------NDGYD---PLDCIHLRYPCq------dPFPSFD---- 203 Planoprotosteli...
PSC76438     184 l-----------------------------------------sYHTCFp--HAPFNPFHFLCp------lDGPGLLg--- 211 Micractinium co...
VDK34970     142 acdli----------------------------------gtstAFHCPk--HFQFLTLSPDC--------SFFGREcvsg 177 Taenia asiatica
RWS13400     187 eyltpgmllfr----------------------ksicafttgtEIVCLkieHSQSERSAIIAnvldiekvLVETLEnd-- 242 Dinothrombium t...
XP_004344537 224 g-----------------------------------------vGPQKP---VYDRVCEIALP--------SPLSFIt--- 248 Capsaspora owcz...
Feature 1                                                    
6Q0R_B       249 --PAFQLKKd------------qVVLLNts---ysLVACAVSVH 275 human
6PAI_C       239 --PAFQLKKd------------qVVLLNts---ysLVACAVSVH 265 human
XP_001417033 263 -sDAVMRDLvd----------ggKFALNta---daLLTVDIATA 292 Ostreococcus lucimarinus CCE9901
XP_003055373 235 --PAVAGVIaa-----------eEIIEEgd----sDYEEEEEEG 261 Micromonas pusilla CCMP1545
XP_019857646 185 --PTLSLQLq------------dTILVNtg---ctIVAIEKSRS 211 Amphimedon queenslandica
PRP76383     204 --PRLNFISp------------nIMLINtg---saVHCLRMHRA 230 Planoprotostelium fungivorum
PSC76438     212 --DSTECSSg------------aWDRSGsgsgagdGGTLAIALY 241 Micractinium conductrix
VDK34970     178 wsAEVVGGSp-------------NCVYNet---grLRVTWVSQG 205 Taenia asiatica
RWS13400     243 -kSNNSIRLltyellvcgleftpTTVFAf------VHAVIRDAW 279 Dinothrombium tinctorium
XP_004344537 249 --SGVSLVLd------------dLYVFNtg---eqLLVVDFRTD 275 Capsaspora owczarzaki ATCC 30864

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