Conserved Protein Domain Family
CYP4V-like

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cd20660: CYP4V-like 
cytochrome P450 family 4, subfamily V, and similar cytochrome P450s
This group is composed of vertebrate cytochrome P450 family 4, subfamily V (CYP4V) enzymes and similar proteins, including invertebrate subfamily C (CYP4C). Insect CYP4C enzymes may be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides. CYP4V2, the most characterized member of the CYP4V subfamily, is a selective omega-hydroxylase of saturated, medium-chain fatty acids, such as laurate, myristate and palmitate, with high catalytic efficiency toward myristate. Polymorphisms in the CYP4V2 gene cause Bietti's crystalline corneoretinal dystrophy (BCD), a recessive degenerative retinopathy that is characterized clinically by a progressive decline in central vision, night blindness, and constriction of the visual field. The CYP4V-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410753
Aligned: 17 rows
Threshold Bit Score: 726.364
Created: 6-Aug-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
heme bindingputative
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Comment:based on the binding of Oryctolagus cuniculus CYP4B1 to heme, defined at 4A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                       #                ##      #   #      #            
Q6ZWL3        87 MPLLKLWvgpvPMVALYnAENVEVILTSSKQIDKssmYKFLEPWLGLGLLTSTGNKWRSRRKMLTPTFHFtiledFLDIM 166 human
P29981        71 GPLYRIWagpiAQVGLTrPEHVELILRDTKHIDKslvYSFIRPWLGEGLLTGTGAKWHSHRKMITPTFHFkildiFVDVF 150 tropical cockroach
ACD75823      68 QGIFRIMliskPVIGVTcAETAEVMLNSSKHIDKaqeYGYLHAWLGTGLLTSTGDKWRMRRKMLTPTFHFrilhdFVEVF 147 Cyphoma gibbosum
EFX87734      63 FPVLRFWlgpfPIFLLYtPEGTEALLGSNKLIDKsreYQYLHPWLSTGLLTSTGTKWHGRRKMLTPTFHFkiledFIDIF 142 common water flea
XP_002738927  97 TRVFRIWigpkPVIFVYrADAAECIFNSSKHITKafvYDFLHPWLGTGLLTSTGDKWKSRRRLLTPTFHFkilndFVGVF 176 Saccoglossus ko...
Q9VA27        95 IGINRVWqgtaPRVLLFePETVEPILNSQKFVNKshdYDYLHPWLGEGLLTSTDRKWHSRRKILTPAFHFkilddFIDVF 174 fruit fly
PAA58255      71 HPMFRIWvgiyPIVVLQkAKSVESILSSSKHITKafqYDFLHTWLGTGLLTSAGEKWHSRRKMLTPAFHFsilqdFCPVF 150 Macrostomum lig...
KFM74841      97 KKLFCFWisysPFVVFVkAEAVEELICGTKMTQKswtYDWLHPWLGTGLLTSYGPKWKSRRKLLTPSFHFeilkdFLSVF 176 Stegodyphus mim...
XP_003726922  73 GGIIRMWfgpaPVLVLYgAKYMEVILSSSQHVRKgflYRLLEPWLGLGLLTSTGQKWFHRRKMLTPTFHFsilqcFMDVF 152 purple sea urchin
NP_500637     69 PRMCLLWigpfPCLMLYsADLVEPIFSSTKHLNKgfaYVLLEPWLGISILTSQKEQWRPKRKLLTPTFHYdilkdFLPIF 148 nematode
Feature 1                                                                                        
Q6ZWL3       167 NEQANILVKKLEkhinq------eafnCFFYITLCALDIICETAMGknigaqsnddSEYVRAVYRMSEMIFRRIKmpwlw 240 human
P29981       151 VEKSEILVKKLQskvgg------kdfdIYPFITHCALDIICETAMGiqmnaqeeseSEYVKAVYEISELTMQRSVrpwlh 224 tropical cockroach
ACD75823     148 NQQTCVLIEKLKhhvdk------gqfnVFQDIALCALDIICETAMGqhvna-qtkeSAYVQSVYKMCGFVEKRMRtpwhy 220 Cyphoma gibbosum
EFX87734     143 NKQSVVLVEKLKeahqdmvannhdrinLFPYVARCTLDIICETAMGrhvdaqlnndSEYVKAVCTLGRVVQTRQAqpwlq 222 common water flea
XP_002738927 177 NEHSSVLVTKLNnyagk------eefnVFPLITHCVLDIICETAMGiktnaqvdcdSDYVQAVSGMSTVLQDRMKspwfw 250 Saccoglossus ko...
Q9VA27       175 NEQSAVLARKLAvevgs------eafnLFPYVTLCTLDIVCETAMGrriyaqsnseSEYVKAVYGIGSIVQSRQAkiwlq 248 fruit fly
PAA58255     151 SEQSRVLLQVLDdqlnad---gqaeldIFPYMGRCALDIICETAMGcqvhaqteqnSEYVASVANMSEIVMRRLKnplyy 227 Macrostomum lig...
KFM74841     177 NEQSQILVKILQketkk------pwtdVTMPVTLCSLDIICETTLGvsisaqqnsdSQYVKCVLRTSEIIMERMVspqyw 250 Stegodyphus mim...
XP_003726922 153 NEQSTILVKKLEkfadk-----setinIFPLVTNCVLDIICDTAMGrctnaqedgdNEYVQAVGRMGELVIARAKnpltw 227 purple sea urchin
NP_500637    149 NEQSKILVQKMCslgae------eevdVLSVITLCTLDIICETSMGkaigaqlaenNEYVWAVHTINKLISKRTNnplmw 222 nematode
Feature 1                                                                                        
Q6ZWL3       241 ldlwylmfkegweHKKSLQILHTFTNSVIAERanemnanedcr-------------gdgrgsapskNKRRAFLDLLLSvt 307 human
P29981       225 pkvifdlttmgkrYAECLRILHGFTNKVIQERkslrqmtgmkpt-----------isneedellgkKKRLAFLDLLLEas 293 tropical cockroach
ACD75823     221 nktmydlfgpgevHDHHLKILHEFTIKVIKDRmsnfnaeraqrllddan-kkkdwvncsesetncrKTRLAFLDMLLFms 299 Cyphoma gibbosum
EFX87734     223 pellfqchpmaktQQKCLDILHGFTDKVLQERkaehrirkaqelaqkenktspasadvddnvdlikKPRLAFLDLLIEas 302 common water flea
XP_002738927 251 pdtfynltedgkkHGKFLQILHKMTNKVIKDRsaelskhlasqgq--------tvtedtemttiggRKHLAFLDMLLYmh 322 Saccoglossus ko...
Q9VA27       249 sdfifsltaeyklHQSYINTLHGFSNMVIRERkaelailqennnnn-------nnnapdayddvgkKKRLAFLDLLIDas 321 fruit fly
PAA58255     228 seslfarsrlsaeQNACLGVMHAFTTGVIAERradfaamseee-------------rrdqmairrrRKRLTFLDLLLFes 294 Macrostomum lig...
KFM74841     251 vdwifgftkrgrqFKSDLKLLHNFTRTVIQEKkkkllcg---------------------daetakRKRKALMDLLLEhh 309 Stegodyphus mim...
XP_003726922 228 pdylfgklnagkeHDKTLKILHDVTDNMIQERlkeppsvthe---------------dedetvarrRKRIAFLDLLLAmh 292 purple sea urchin
NP_500637    223 nsfiynltedgrtHEKCLRILHDFTKKVIVERkealqe-----------------------ndykmEGRLAFLDLLLEmv 279 nematode
Feature 1                          #  ##  #                                                      
Q6ZWL3       308 ddegnrlsHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGksdrp----atvedLKKLRYLEC 383 human
P29981       294 eng-tkmsDTDIREEVDTFMFEGHDTTSAGICWALFLLGSHPEIQDKVYEELDHIFQgsdrs----ttmrdLADMKYLER 368 tropical cockroach
ACD75823     300 dng-kvlsIDDIREEVDTFMFEGHDTTAAGMNWCTYLIGSDEKVQGKVCEELDRVFGnsdrm----ptmddLKELKYLEC 374 Cyphoma gibbosum
EFX87734     303 qdg-tllsDLDIREEVDTFMFEGQDTTAAAVSWCLYLIGSHPEVQERISEELNRIFGtsdrp----itmtdILQLKYLEC 377 common water flea
XP_002738927 323 ead-peftFTDIREEVDTFLFEGHDTTAAALTWATYLIASHPEVQERIFEELDGIFGdsnrp----vtmddLKEMKYLDN 397 Saccoglossus ko...
Q9VA27       322 keg-tvlsNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGddketp---atmknLMDMRYLEC 397 fruit fly
PAA58255     295 etg-akltDSDIREEVDTFMFEGHDTTAAAMTWCLFLLGRHPDVQAEVHKEIDAIWEegrlspeghltsecLNQLSLLDR 373 Macrostomum lig...
KFM74841     310 let-kslsEEDIREEVDTFAFEGHDTTSMGISWALYLIGLHEDVQAKLHEEMDRIFGddterp---vttddLKDMNYLDY 385 Stegodyphus mim...
XP_003726922 293 red-asftLKDIREEVDTFMFEGHDTTAAAISWAILEIGQHPDIQERLHAELDEVFGdsirp----vtsddLSRLSYLTR 367 purple sea urchin
NP_500637    280 ks--gqmdETDVQAEVDTFMFEGHDTTSTGLMWAIHLLGNHPEVQRKVQAELDEVMGddedv-----tiehLSRMKYLEC 352 nematode
Feature 1                  #   #                                                            ###  
Q6ZWL3       384 VIKETLRLFPSvPLFARSVSEDCEVagYRVLKGTEAVIIPYALHRdpryfpnPEEFQPERFFPenaqgRHPYAYVPFSAG 463 human
P29981       369 VIKESLRLFPSvPFIGRVLKEDTKIgdYLVPAGCMMNLQIYHVHRnqdqypnPEAFNPDNFLPervakRHPYAYVPFSAG 448 tropical cockroach
ACD75823     375 CIKEAQRLFPSvPYFGRTTTEEAQIssFRVPKDVTVIVFTSAIHRdtrwfpnPEHFDPDRFLPensvgRHPFAYIPFSAG 454 Cyphoma gibbosum
EFX87734     378 CIKEALRLFPSvAMYGRTLSEDATIhgYVIPSGSTVAVIPYSLHRdpvqfpdPERFDPERFMGdnkrsRHPYAYVPFSAG 457 common water flea
XP_002738927 398 TIKESLRMYPSvPIFARQLDEDVTLagFKIPSEANILVAPYALHRdekyfpnPEVFDPDRFSSsrskhRHPYAYVPFSAG 477 Saccoglossus ko...
Q9VA27       398 CIKDSLRLFPSvPMMARMVGEDVNIggKIVPAGTQAIIMTYALHRnprvfpkPEQFNPDNFLPencagRHPFAYIPFSAG 477 fruit fly
PAA58255     374 CVKEALRIYPSvPFFGREAAEDIKVdgYTITAGTTVLALATQLHRdpeyfpePEKFNPDRFLPeavrgRNPYAYVPFSAG 453 Macrostomum lig...
KFM74841     386 VLKESQRLYPSvPMIGRQAIEDTKFcgYTIPKGSSCVVLTYQLHRdkdvfsdPEKFDPDRFLPenslnRHPYAYIPFSAG 465 Stegodyphus mim...
XP_003726922 368 IVKESLRIIPAvPMVARSLDEDIVLdgKVVPKEAMIMLHIYALHQdpqqfpdPDQFDPDRFLPenaekRHPYAFVPFSAG 447 purple sea urchin
NP_500637    353 ALKEALRLFPSvPIITRELSDDQVIggVNIPKGVTFLLNLYLVHRdpsqwkdPDVFDPDRFLPensiaRKSFAFIPFSAG 432 nematode
Feature 1         #####  ##   #                                      
Q6ZWL3       464 pRNCIGQKFAVMEEKTILSCILRHFwiesnqKREELGLEGQLilRPSNGIWI 515 human
P29981       449 pRNCIGQKFATLEEKTVLSSILRNFkvrsieKREDLTLMNELilRPESGIKV 500 tropical cockroach
ACD75823     455 lRNCIGQKFAMMEEKVILSSIFRNFkvkscqSREELLPVGELilRPQKGIFI 506 Cyphoma gibbosum
EFX87734     458 pRNCIGQKYAVMEEKVVLATVLRNFhlesleKREDLVLIGELvlRPRDGVQV 509 common water flea
XP_002738927 478 lRNCIGQKFALYEEKVVLSSIFRKFkietamRREDLKPTGEIilRPLNGINI 529 Saccoglossus kowalevskii
Q9VA27       478 pRNCIGQKFAILEEKAVISTVLRKYkieavdRREDLTLLGELilRPKDGLRV 529 fruit fly
PAA58255     454 pRNCIGAKFAQLEEKAVLCWFLRHYdvtslqTEEEVDPAGELilRPAHGIRL 505 Macrostomum lignano
KFM74841     466 pRNCIGQRFAIMEEKTVVCHILRNYtlesldPRDTIPPAPELilRSSKPIRV 517 Stegodyphus mimosarum
XP_003726922 448 pRNCIGQKFAMMETKLTLANIFRRFsiesvqTIEGAKPAGQLilRPVEGNIL 499 purple sea urchin
NP_500637    433 sRNCIGQRFALMEEKVIMAHLLRNFnvkaveLMHEVRPKMEIivRPVTPIHM 484 nematode

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