Conserved Protein Domain Family
CYCLIN_CCNL1_rpt1

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cd20589: CYCLIN_CCNL1_rpt1 
first cyclin box found in cyclin-L1 (CCNL1) and similar proteins
CCNL1 is an L-type cyclin involved in the regulation of RNA polymerase II (pol II) transcription. It functions in association with cyclin-dependent kinases (CDKs). CCNL1 contains two cyclin boxes. This model corresponds to the first one. The cyclin box is a protein binding domain.
Statistics
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PSSM-Id: 410292
Aligned: 15 rows
Threshold Bit Score: 246.196
Created: 12-Apr-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9UK58        72 DGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEaPRRIRDVIN 151 human
Q7ZVX0        52 DGLDHETETDLRILGCERIQSAGILLRLPQVAMATGQVIFQRFFFSKSFVKHNFEIVAMACVNLASKIEEsPRRVRDVIN 131 zebrafish
XP_007886943   3 DGLDLEVETDLRILGCELIQSAGILLRLPQVAMATAQVLFQRFFFSKSFVKHSFEIVAMAGINLASKIEEaPRRVRDVIN 82  elephant shark
ELU11173       3 DGLDRDTEWDLRILGCELIQTSGILLKLPQVAMAAGQVLFQRFYFSKSFVKHSMEIVAMACINLAAKIEEaPRRIRDVIN 82  Capitella teleta
XP_002601261  38 DGLEHETEGDLRILGCEYIQTAGVLLRLPQTAMATGQVLFQRFFYSKSLVKHNMEIVAMACVYLASKIEEaPRRIRDTIN 117 Florida lancelet
XP_002741524  37 DGLDMETEIDLRILGCELIQTAGILLKLPQVAMATAQVILQRFYYSKSFVKHSMETLAMACINLASKIEEaPRRIRDVIN 116 Saccoglossus ko...
RUS74883      39 DGLEKEVETDLRILGCELIQTAGILLKLPQVAMATAQVVFQRFYYAKSFIKHNMEVVAMASLMLASKIEEcPRRNRDVIN 118 eastern emerald...
PRD34458      79 DGLDPEAEKELRILGCELIQTSGILLRLPQVAMATGQVLFQRFFYSKSFVRQPMEIVAMACVTLASKIEEaPRRIRDVIN 158 Nephila clavipes
EFX87808      34 DGLDPETEMDLRILGCELIQTAGILLRLPQVAMATGQVLFHRFYHSKSLVRQPMEITAMGCLCCASKVEEaPRRIRDVIS 113 common water flea
XP_013411114  39 DGLDHEAETDLRILGCELIQTAGILLKLPQVAMATGQLLFQRFYYSKSFIKHSMETTAMACMHLASKIEEdPRRIRDVVN 118 Lingula anatina
Q9UK58       152 VFHHLRQLRGkrtPSPLILDQnYINTKNQVIKAERRVLKELGFC 195 human
Q7ZVX0       132 VFHHLKQGKGk-kSTPLILDQnYINTKNQVIKAERRILKELGFC 174 zebrafish
XP_007886943  83 VFHHLRQLRGkrtPASLVLDQnYINTKNQVIKAERRVLKELGFC 126 elephant shark
ELU11173      83 VFHHIKQVRNgktISPLILDQnYISMKNQVIKSERRVLKELGFC 126 Capitella teleta
XP_002601261 118 VFHHIRQRRNnrpAQPLVLDQnYINTKNQVIKAERRVLKELGFC 161 Florida lancelet
XP_002741524 117 VFHHVRQKRHnrpVVPLVLDQnYINLKNNVIKAERRVLKELGFC 160 Saccoglossus kowalevskii
RUS74883     119 VFHHIKQVRNkrnIHPLVLDQhYINLKNQVIKAERRVLKELGFA 162 eastern emerald elysia
PRD34458     159 VFHHIKQVRSgknIQPLILDQnYINLKNQVIKAERRVLKELGFC 202 Nephila clavipes
EFX87808     114 VFEHIKQVRGgktIEPVLLDQgYINLKNQVIKAERRVLKELGFC 157 common water flea
XP_013411114 119 VFHHIKQVRNgkiIKPLIIDEgYVSIKNQVIKAERRVLKELGFC 162 Lingula anatina
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