Conserved Protein Domain Family
CYCLIN_AtCycD-like_rpt2

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cd20544: CYCLIN_AtCycD-like_rpt2 
second cyclin box found in plant cyclin-delta family
This subfamily is composed of plant delta family cyclins, including a group of G1/S-specific D-type cyclins from Arabidopsis thaliana which may activate the cell cycle in the root apical meristem (RAM) and promote embryonic root (radicle) protrusion. Members of this family contain two cyclin boxes. This model corresponds to the second one. The cyclin box is a protein binding domain.
Statistics
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PSSM-Id: 410247
Aligned: 37 rows
Threshold Bit Score: 52.6993
Created: 12-Apr-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P42751       184 VTPFDFISFFAYKIdpsg--tflgFFISHATEIILSNIKea-sFLEYWPSSIAAAAILCVANElpslss--vvnpheSPE 258 thale cress
PLY88079     157 ITPFNFISCFIPCFcnes---snrEFVSLTTQILLATTKdi-nFVGYRSSTIAMAATLMVIDQnltkesl-emklksTWL 231 Lactuca sativa
PWA58693     281 SSPYEYIRCLMLCIckrv---peeQRVHLAKQILFASTQdl-iILGHRPSIIALAAVLYVMDQn------------lTRE 344 sweet wormwood
XP_020244401 168 VTPFDFVAHFVDSMkpeifgrsraGLISRVADLVLRTCRvv-eFSGCRPSEIAAAAIIRAAKDipdis-----dgesTDL 241 garden asparagus
EEF36622      98 ITPLCFVQYFWSLVah-------pAIKSNAKEIIVQSQGdi-rFTQYNPSVIAASAVLVSYYNep-----------aCRQ 158 castor bean
EFH67870     114 ITPMCFIGYFLKACepq----deaLEVRQSITHIILETQsdirFSCYKPSIIAGSAVIAFFSDrspeys---qiyeeKVE 186 Arabidopsis lyr...
XP_015580674 153 VNALCFLSNFLPLVeel-----deRFKANVIELIIQSQGdi-nFTQFKPSVIAASAIFASCNGl-------------YSV 213 castor bean
XP_017239200 150 TLPFHFVPLFLHYLtl------prGFTSVPVHKIIIWTQadigFTKFRPSAVAASAILCALAKlfrddsndfatvilSRY 223 Daucus carota s...
GAY52538     140 VVAVNFVPFFLNISsa-------kGIKRRHVNRIIIEAQadlsFASCKPSVIAAAALVHVCKLllrdengerpdakrCRE 212 Citrus unshiu
OHS94702     191 KLSYPNVKTFMRMImsaa---kvnDVAHFLIDLIIEKVSmmnhFMNYYPSIIAASIVAVTLAGtgnf------dearKVI 261 Tritrichomonas ...
P42751       259 TWCDGLs-------kEKIVRCYRLM 276 thale cress
PLY88079     232 NRFLDH---------GDVYNCYCLI 247 Lactuca sativa
PWA58693     345 SMGLIVnraggnyafNQVRSGIHML 369 sweet wormwood
XP_020244401 242 LKLLKPwv-----neESLNTCLKLL 261 garden asparagus
EEF36622     159 KLIGGNikl----dqRQLEDCTKMM 179 castor bean
EFH67870     187 RLLGYId-------kNKLKNCLVLM 204 Arabidopsis lyrata subsp. lyrata
XP_015580674 214 HKEDFTsadl-kldpAKLNACELMM 237 castor bean
XP_017239200 224 PRHDDTi-------rGELAECREMM 241 Daucus carota subsp. sativus
GAY52538     213 SLIDSTyv-----deDSLDSFCTML 232 Citrus unshiu
OHS94702     262 VGQIFPd-------eKMLKECLHDV 279 Tritrichomonas foetus
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