Conserved Protein Domain Family
Bbox2_TRIM9-like

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cd19764: Bbox2_TRIM9-like 
B-box-type 2 zinc finger found in tripartite motif-containing proteins, TRIM9, TRIM67 and similar proteins
This family includes a group of tripartite motif-containing proteins including TRIM9 and TRIM67, both of which belong to the C-I subclass of TRIM (tripartite motif) family of proteins that are defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, consisting of three consecutive zinc-binding domains, a RING finger, Bbox1 and Bbox2, and a coiled coil region, as well as a COS (carboxyl-terminal subgroup one signature) box, a fibronectin type III (FN3) domain, and a B30.2/SPRY (SplA and ryanodine receptor) domain positioned C-terminal to the RBCC domain. The type 2 B-box (Bbox2) zinc finger is characterized by a CHC3H2 zinc-binding consensus motif. TRIM9 (the human ortholog of rat Spring), also known as RING finger protein 91 (RNF91), is a brain-specific E3 ubiquitin-protein ligase collaborating with an E2 ubiquitin conjugating enzyme UBCH5b. It plays an important role in the regulation of neuronal functions and participates in neurodegenerative disorders through its ligase activity. TRIM67, also termed TRIM9-like protein (TNL), is a protein selectively expressed in the cerebellum. It interacts with PRG-1, an important molecule in the control of hippocampal excitability dependent on presynaptic LPA2 receptor signaling, and 80K-H (also known as glucosidase II beta), a protein kinase C substrate. It negatively regulates Ras signaling in cell proliferation via degradation of 80K-H, leading to neural differentiation including neuritogenesis.
Statistics
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PSSM-Id: 380822
Aligned: 16 rows
Threshold Bit Score: 52.0065
Created: 4-Sep-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C H C C C C H HClick to see conserved feature residue pattern help
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens Midline-1 (2JUN) binds two Zn2+ ions through its B-box motif.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #        #  #    #  #     #         #     
Q6ZTA4       302 TCPEHEmENYSMYCVsCRTPVCYLCLeegrHAk-------HEVKPL 340 human
PIK42505     245 TCSEHKdENLSMYCImCKVPVCYLCQnegkHMn-------HEMNAL 283 Japanese sea cucumber
XP_002401595 239 KCSEHGdEALSMYCMvCKAAACVLCLqdgrHAn-------HDVQPL 277 black-legged tick
ELU07718     212 KCNEHVdESLSMYCLmCKTVVCYACVqdgrHMn-------HDVQAL 250 Capitella teleta
XP_013394348 218 KCSDHGdENISMYCLiCKVPLCCLCMqdgqHVn-------HDVQAL 256 Lingula anatina
KPI92669     184 TCSDHG-SPPVLYCNtCLVPICQRCLge-rHSa-------HETQQL 220 Asian swallowtail
NP_723600    254 VCGEHE-ETLSQYCLsCKAPACGLCIgelrHQa-------HDVQSI 291 fruit fly
NP_503395    275 RCATHPgEGLTMYCLaCKVPVCSRCLqdlrHAn-------HDVQSL 313 Caenorhabditis elegans
PVD26690     214 KCHEHPtELLAMYCIsCRLPVCNLCLrrspHEprgaapglHGQESE 259 Pomacea canaliculata
ETO13901      72 NCDEHPnEALTMYCLsCQQCICNICYekgrHSrv-----nHISKNL 112 Reticulomyxa filosa

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