Conserved Protein Domain Family
SET_SETD1A

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cd19204: SET_SETD1A 
SET domain (including post-SET domain) found in SET domain-containing protein 1A (SETD1A) and similar proteins
SETD1A (EC2.1.1.43), also termed lysine N-methyltransferase 2F, or Set1/Ash2 histone methyltransferase complex subunit SET1, is a histone-lysine N-methyltransferase that specifically methylates 'Lys-4' of histone H3 (H3K4me), when part of the SET1 histone methyltransferase (HMT) complex, but not if the neighboring 'Lys-9' residue is already methylated. Human SET domain containing protein 1A (hSETD1A) expression occurs at a high rate in hepatocellular carcinoma patients and controls tumor metastasis in breast cancer by activating MMP expression.
Statistics
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PSSM-Id: 380981
Aligned: 5 rows
Threshold Bit Score: 332.759
Created: 12-Jun-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens mixed-lineage leukemia protein MLL1 binds cofactor product S-adenosylhomocysteine and histone peptide through its SET domain.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               ####                #                         ######      
O15047       1555 SDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADMREKRYVQEGiGSSYLFRVDHDTIID 1634 human
KYO20533      911 SDLLKLNQLKFRKKRLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQVVADMREKRYAQQGiGSSYLFRVDHDTIID 990  American alli...
ABC86576      254 SDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQSIRQMVADNWEKRYAQEGiGSSYLFRVDHDTIID 333  zebrafish
XP_014347595 1618 KPTALDAHDKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQVVADMREKRYVQEGiGSSYLFRVDHDTIID 1697 coelacanth
OCT56683     1545 SDLLKLNQLKFRKKKLRFGRSHIHEWGLFAMEPIAADEMVIEYVGQNIRQVVADMREKRYSQQGiGSSYLFRMDQDTIID 1624 African clawe...
Feature 1                ######       ###        #               ######      ####          
O15047       1635 ATKCGNLARFINHCCTPNCYAKVITIEsQKKIVIYSKQPIGVDEEITYDYKFPLEDNKIPCLCGTESCRGSLN 1707 human
KYO20533      991 ATKCGNLARFINHCCTPNCYAKVITIEaQKKIVIYSKQPIGVNEEITYDYKFPIEDNKIPCLCGMENCRGTLN 1063 American alligator
ABC86576      334 ATKCGNLARFINHCCTPNCYAKVITIEsQKKIVIYSKQPIGVNEEITYDYKFPIEENKIPCLCGTESCRGTLN 406  zebrafish
XP_014347595 1698 ATKCGNLARFINHCCTPNCYAKVITLEsQKKIVIYSKQPIGVNEEITYDYKFPIEENKIPCLCGMENCRGVLN 1770 coelacanth
OCT56683     1625 ATKCGNLARFINHCCSPNCYAKVITIEsQKKIVIYSKQPIGINEEITYDYKFPLEDNKIPCLCGTENCRGTLN 1697 African clawed frog

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