2P9M


Conserved Protein Domain Family
CBS_pair_Euryarchaeota

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cd17784: CBS_pair_Euryarchaeota 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in Euryarchaeota
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341420
Aligned: 7 rows
Threshold Bit Score: 147.568
Created: 19-Feb-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #########   #########     ######   ######  ######           #####               
2P9M_A        15 TKNVITAKRheGVVEAFEKXLkykISSLPVIDdenKVIGIVTTTDIGYNLIRDKYtlettIGDVXtkDVITIHedASILE 94  Methanocaldococ...
AAB86350       3 RDVITVEPSedVVFAFEKLMKh-rISALPVLEe-gKLAGIVTASDLGHNLILDNYelgttVGEVMvkDVATVApgETLAD 80  Methanothermoba...
AAM02082      17 TKDPITASPqvGVIEAFEIMLkhdVGALPVVDdegRLIGLVTRTDLGRALLEDEYepgttVEEVMerDVVVVHpdDTLLE 96  Methanopyrus ka...
WP_042704384  12 TKNVFTTNPdeDVVFAFEKLMknkVSALPVLDedgKMIGIVTASDLGYNLILDNYklgtkVSSVMvkNVTSVSpeESLYD 91  Methanobrevibac...
WP_019267801  12 TTDVITTTSnvDVVNAFEELMehkISAMPVVDd-gKLVGIITATDLGHNLILDKYelgtdVKSIMikDVVTVSpeNTISE 90  Methanobrevibac...
WP_016358881  12 TTNVVTVDPdeEVVFAFERLMkhkISAMPVIDn-nKMVGIVTATDLGHNLILDKYtlgtkVVDVMvkQVAFVRpdDSVME 90  Methanobrevibacter
WP_013181022  13 IKNVISAKTneSVVDAFENMLknrVSCLPIVNidnVLMGIITTTDVGYNLIKDVYtlettLEEVMtkDVISVKpsETIKQ 92  Methanococcus v...
Feature 1                                                 
2P9M_A        95 AIKKXDisgkkeeIINQLPVVDknnKLVGIISDGDIIRTIS 135 Methanocaldococcus jannaschii DSM 2661
AAB86350      81 AIEKMNdyssdegIINQLVVVDd-gDMVGIIADGDIIRALK 120 Methanothermobacter thermautotrophicus str. Delta H
AAM02082      97 ALKRMTsap--egIYNQLPVVDdeeKLVGILTDGDILRWIA 135 Methanopyrus kandleri AV19
WP_042704384  92 AICTMEenapggsIVNQLPVLEn-gTLVGIISDGDIIKALK 131 Methanobrevibacter arboriphilus
WP_019267801  91 AIETMKsnapdsnILNQLPVVEn-gKLVGIISDGDIIKLIF 130 Methanobrevibacter smithii
WP_016358881  91 AVSEMDnnapgneIVNQLPVLDh-gKLVGIISDGDIISALK 130 Methanobrevibacter
WP_013181022  93 ALQKMDingtaseIINQLPVVDddgKLIGIISDGDIIRYIS 133 Methanococcus voltae

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