Conserved Protein Domain Family
CBS_pair_NeuB

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cd17773: CBS_pair_NeuB 
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domain present in N-acylneuraminate-9-phosphate synthase
This CD contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain present in N-acylneuraminate-9-phosphate synthase NeuB. NeuB catalyzes the condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine, directly forming N-acetylneuraminic acid (or sialic acid). The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341409
Aligned: 17 rows
Threshold Bit Score: 187.457
Created: 16-Mar-2011
Updated: 31-Jul-2017
Structure
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Aligned Rows:
 
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #########   #########     ######   ######  ######             #####         
ZP_00514892   2 LIDRNLSKYIVFSEDSILNALKKISDNksRIIFSVTesGVLEGVLTDGDLRRWLVEq-NTIDLNqaVSHISNKRFKYASf 80  Crocosphaera wat...
BAI65415      2 IIERNIAPYVVFAEDPILNALQKISANgqRIIFLVNesGILRGSLSDGDFRRWLIAn-PTASLEtsALDAANTNPQTAPa 80  Rothia mucilagin...
EGG93726      2 IIERNIIKFIVFAEDSLLNALRKISDNksRLVFSVSesGKLEGVLTDGDIRRWLLEn-KDADLNipVNKVSNKHYVSLHe 80  gamma proteobact...
AII48499      5 LIERNFTQFVVFAEDSILSALSKITANqsRLIFVVSesGILQGVLTDGDFRRWIANc-GEIDLNrpVTAAMNSNCRSAAe 83  Synechococcus sp...
KHK99847      2 IIERDLAPFLVFAEDSIISALAKISANrqRIVFCVDahGILQGSLSDGDFRRWIIEn-PAAPTDatAGEVANNRVRTLPa 80  Microbacterium s...
BAE48896      2 IIDKNIAKYLVFSEDTLKNALVKINDNkeRVVFAVDetGRLEGVLTDGDVRRWLVAa-DPVDLGiaAGKVANGDFRSARl 80  Magnetospirillum...
EPH01027      2 IVNRQTTPFAVFGEDTILTALTKITDNksGIVFCVDehGILTGSFSDGDFRRWITSe-PDGDMTtpVQVAANRDCIHAPl 80  Propionibacteriu...
KHL05019      2 IIERNIAPFIVFAEAPILTALAKITENqeRIAFCVDehGVLRGSLSDGDFRRWIVQn-PNAELDvpAVHVANPGVRSARa 80  Sinomonas sp. MU...
KIK84311      2 IIERRLTPYLVFPEDSLLAALQKMTDNreRTVFVVDshGFLVGSLTDGDVRRWLVAh-PEASLDvaAADVAHRNPATAPl 80  Burkholderia sp....
AFZ49063      2 IIDRNLRPYIIFTEDSILNALKKIEENqgRIIFCVSenGQLEGLLTNGDIIRWLTQqkENADLSqaVSEIANQSYLYAFq 81  Dactylococcopsis...
Feature 1                                                 
ZP_00514892  81 EEDPEKINSYFSe-QIEFIPLLDdNDRLVAIAG--KRPNEIK 119 Crocosphaera watsonii WH 8501
BAI65415     81 DADPETLRAYFAk-GINHVPLTDeRGHLVALAM--DEQDVLR 119 Rothia mucilaginosa DY-18
EGG93726     81 EATTEEIIAQFNn-RISTIPIIDkQGHLVSLAQ--EQAAEFK 119 gamma proteobacterium IMCC1989
AII48499     84 GTSAGDLNALLNs-RITALPLLDsHGRIVAVAR--RATDGLQ 122 Synechococcus sp. KORDI-52
KHK99847     81 STAPAAIAEAFTvnGISHVPLVDeRGHVVAVAI--DRADILR 120 Microbacterium sp. MUSC115
BAE48896     81 GGDRHAIEAMLDs-RINFVPLVDdYGHLVGVAR--ARRPVMD 119 Magnetospirillum magneticum AMB-1
EPH01027     81 DADASTISQLFRp-GVEVIPLVDeRGHLTAVAT--EGAAEMT 119 Propionibacterium sp. HGH0353
KHL05019     81 GTPLPDLGTLMGr-EIRHLPLVDeRGRLVAVAV--DRADVFT 119 Sinomonas sp. MUSC117
KIK84311     81 GASPAEMREALPa-GALHLPLLDeRGRLTALAI--NREAELR 119 Burkholderia sp. 2385
AFZ49063     82 NDPPQKIESYLE--KVLYVPIIDqHGHLTAVARrrKSNEGIN 121 Dactylococcopsis salina PCC 8305

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