2MSE,1WXM


Conserved Protein Domain Family
RBD_ARAF

?
cd17133: RBD_ARAF 
Ras-binding domain (RBD) found in serine/threonine-protein kinase ARAF
ARAF, also termed proto-oncogene ARAF, or proto-oncogene ARAF1, or proto-oncogene PKS2, belongs to the RAF protein family. The RAF family includes three RAF kinases ARAF, BRAF, and RAF1/CRAF, encoded by proto-oncogenes, which activate the mitogen-activated protein kinase/extracellular-signal-regulated kinase (MAPK/ERK) cascade downstream of RAS. They share a common structure consisting of an N-terminal regulatory domain and a C-terminal kinase domain. There are three conserved regions (CR1-3) in the regulatory domain, CR1 contains a Ras-binding domain (RBD) and a cysteine-rich domain (CRD), CR2 is a serine/threonine-rich domain, and CR3 encodes the kinase domain required for RAF. The RBD of RAF has a beta-grasp ubiquitin-like fold, a common structure involved in protein-protein interactions. ARAF is predominantly found in urogenital tissue with a low basal kinase activity. It directly cross-talks with NODAL/SMAD2 signaling in a MAPK-independent manner. It also promotes MAPK pathway activation and cell migration in a cell type-dependent manner. Moreover, ARAF acts as a scaffold to stabilize BRAF-CRAF heterodimers. Mice deleted for ARAF are viable but die perinatally.
Statistics
?
PSSM-Id: 340653
Aligned: 6 rows
Threshold Bit Score: 136.192
Created: 25-Jun-2015
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:RBD_Raf-KRas interaction site [polypeptide binding site]
Evidence:
  • Comment:RBD of ARAF is an effector of a membrane-associated GTPase protein KRAS. KRAS binding to the membrane surface blocks its binding site for effector proteins. Some disease-associated KRAS mutations disrupt this autoinhibition
  • Structure:2MSE; Homo sapiens RBD of ARAF binds GTPase protein KRAS, contacts at 4A.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1         #      # ####              #  ####                                       
2MSE_D         1 GTVKVYLPNKQRTVVTVRdGMSVYDSLDKALKVRGLNQDCCVVYRLIk-GRKTVTAWDTAIAPLDGEELIVEVL 73  human
1WXM_A         8 GTVKVYLPNKQRTVVTVRdGMSVYDSLDKALKVRGLNQDCCVVYRLIk-GRKTVTAWDTAIAPLDGEELIVEVL 80  human
BAP84549      23 GTIRVYLPNKQRTVVNVRpGQTVYDSLDKALKVRGLSQDCCAVFRLLe-GRKRLTEWDTDITPLVGEELLVEVL 95  zebrafish
NP_001083376  69 GTVKVYLPNQQRTVVNVRpGMTVYDSLDKALKVRGLSQECCAVYRLIq-GRKALTDWETDITPLVGEELMVEVL 141 African clawed frog
ETE60628      61 STIKVDLPNQQRTVVTVRpGMTVYDSLDKALKVRGLNQDCCVVYRKRgdGRKTITDWETDLVNLEGAELSVEVL 134 king cobra
XP_014348730  57 GTIRVYLPNKQRTVVNVRaGMTMYDVLDKALKLRGLNQDCCAVYRLId-GRKTLTDWETDISPLVGEELLVEVL 129 coelacanth

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap