4AD4


Conserved Protein Domain Family
GH99_GH71_like

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cd11573: GH99_GH71_like 
Click on image for an interactive view with Cn3D
Glycoside hydrolase families 71, 99, and related domains.
This superfamily of glycoside hydrolases contains families GH71 and GH99 (following the CAZY nomenclature), as well as other members with undefined function and specificity.
Statistics
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PSSM-Id: 211414
Aligned: 7 rows
Threshold Bit Score: 258.964
Created: 24-Feb-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand bindingputative
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Comment:around the (putative) catalytic residues, the glycan ligand is bound with the enzyme coordinating the -2, -1, +1, and +2 positions around the cleavage site
  • Structure:4AD4: endo-alpha-mannosidase from Bacteroides xylanisolvens binds the inhibitor glucose-1,3-isofagomine and the reducing-end product alpha-1,2-mannobiose, contacts at 4 A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # #                                                                         
4AD4_A        42 FCFYYDWYgseaidgqyrhwahaiapdpnggsgq------------npgtipgtqesiasnfypqlgrysssDPNILTKH 109  Bacteroides xy...
AEJ61824      66 VLAHYMPWyeavvdpdhpeneyfgwhwhmgffdp-------------ytvgpdgkreiashyypltgpydsrDPDLIEYQ 132  Spirochaeta th...
GAA88202      60 VFAHFIVGnaa-----------------------------------------------------------amTAEQWESD 80   Aspergillus ka...
NP_863991    149 VMCGYQGWfncegdgaglgwrhwgrdskkplgpgnvtvdl-wpdmseyspgerfatefqhsdgsvaevfssaNEQTVRRH 227  Rhodopirellula...
P0C7J1        92 LVAFYLPQfhpipendawwgkgftewrnvsr------------------tlpqfeghqqprlpadlgfydlrTPDVMREQ 153  Xanthomonas ca...
NP_125780    218 ISAVYMPHsasyfcqeaee------------------------------------------epllgcfedtsLDIVQWKH 255  Pyrococcus aby...
ZP_06243277   20 VFGGTQMNpksfgalkdmpvyiqewhvwwgfpypdrqqpfshmsstltaerepwrlnwnrngyplvglydaaNPEIMRWQ 99   Victivallis va...
Feature 1                        #                                          #                    
4AD4_A       110 MDMFVMARTGVLALTWWNEQde-------teAKRIGLILDAAdk------kkIKVCFHLEPYpsr--------------- 161  Bacteroides xy...
AEJ61824     133 LLLMKMAGIDGVIVDWYGIKdaldygfiheaTQALFHKIEEAglkfvvcyedQTIRHMIDTDylkst------------- 199  Spirochaeta th...
GAA88202      81 IREAQKAHIDGFALNIAPQDsy--------tDDVLDKAYSAAesv-----gnFSLFLSFDYGsg---------------- 131  Aspergillus ka...
NP_863991    228 FQWMREYGIDGAFVQRFATSlrspa-slanrTAILNHCRRGSee------ngRAFAVMYDLSglre-------------- 286  Rhodopirellula...
P0C7J1       154 ARLAQEYGLGAFCFYFYWFAg----------KTLLEMPITQWhad-----tsITLPFCLCWAnekwarrwdgrghdvlid 218  Xanthomonas ca...
NP_125780    256 IDWANGHGISVFWVDWTMLAwtss---kwrtLEVTRKLLEKN----------MTIGIMIGPIsfteipi----------d 312  Pyrococcus aby...
ZP_06243277  100 IRCMKAAGLTSVALMIHPEWntgigfiqeeqANIIQTALDIAae------enFPIFFMDEVAfrhgsa------------ 161  Victivallis va...
Feature 1                                              #                                         
4AD4_A       162 ---nvqNLRENIVKLITRYGNHPa--FYRkdGKPLFFIYDsyl--------iePSEWEKLLspggsitirntaYDALMIG 228  Bacteroides xy...
AEJ61824     200 --eavaHGKEVFSWLEANWFQSPs--YVKieGRPVVMVFGpqy-------ftsASEWDEIFsg--------laVRPYLVT 260  Spirochaeta th...
GAA88202     132 ----gpWPADRVISTINTYRNRSa--QYHyqGKPLVSTFIga---------dnAGDWSYIKg----------sADCFFMP 186  Aspergillus ka...
NP_863991    287 --geldVVQQDWTRLVNEEAITSsdaYLHhnGMPLVAIWGvgfaerhqpgaytLDDCKALIaql------kraGCSIMLG 358  Rhodopirellula...
P0C7J1       219 qahsadDDLAFIAHVARYMRNPK---YLRvgDRPLLLVYRphllp---epvqtAARWRNWCrdn-------giGEIHLAY 285  Xanthomonas ca...
NP_125780    313 larhlgEYLEIVEEASKFMNYPS---YYKigGRPALFIWSevvfsn--rgnfyRKVYEVVKnq--------tgSCPYIIA 379  Pyrococcus aby...
ZP_06243277  162 -aqkidVSVKRITDFIKKYGSHPg--FYKvdGKPFYYFQTygw-------kvsAPEIERMCaev------draTGGVYWA 225  Victivallis va...
Feature 1                                                 #                                      
4AD4_A       229 LWtssp----------tvqRPFILna--------hfDGFYTYFaatgft-----------------------ygstpTNW 267  Bacteroides xy...
AEJ61824     261 LDa---------------hLENSA------------DTLYPWPpmylsggg-------------------elsilkvVDY 294  Spirochaeta th...
GAA88202     187 SWpdm------------gpARLRDyld-------iiDGAFSWDawpv--------------------------gaqnKNV 221  Aspergillus ka...
NP_863991    359 IPtgw-----------relNRDCVtdpavrsifemaDVISPWTpgryrnpe-------------------qaqrhgeQTW 408  Rhodopirellula...
P0C7J1       286 VQgfe------------rpDPRDIg----------fDAAVEFPpnmstppsvtar----------qrlvnpdfsgdvLDW 333  Xanthomonas ca...
NP_125780    380 DLlprigynfiipgfssfkEWYMWaitrk--ddggdVYIGGYTgwigfygvhkddqgeylpkeefrknfleyykvfvKEW 457  Pyrococcus aby...
ZP_06243277  226 MFgpvtr-------fgkvpQLSMIv-----------DGASIHRrdrtt------------------------rewrlKEQ 263  Victivallis va...
Feature 1                                #                                                    # #
4AD4_A       268 VSMQKWAKen---gKIFIPSVGPGYIDtrirpwn--gsvirtRTDGQYYDAMYRKAIEa-------GVSAISITSFNEWH 335  Bacteroides xy...
AEJ61824     295 LNGFYAKTnq---kEHLIATAFPRFHDiyreagvgpsygylaDLAGGTFHVTFTAAVKs-------VPDIIQIATWNDYG 364  Spirochaeta th...
GAA88202     222 TSDREWMHal--sgKPYMMPVSPWFYTnlpqw-----nknwlWRGDDLWHIRWEQVMNl-------QPAFVQIISWNDYG 287  Aspergillus ka...
NP_863991    409 QPDQQECGan---gQGYLPVVFPGFSWfnlrngd-aplddipRLKGQFLWSQIIAAKKa-------GAEMLYVAMFDEVD 477  Rhodopirellula...
P0C7J1       334 RELARDMEqrplrdYTLYPGVNPGWDNeprrsg---kgriylHASPRRYRDWLARTVQhrlanapsAHRMVFINAWNEWA 410  Xanthomonas ca...
NP_125780    458 RKFAEGRG------KCFIPTVSPGFEKidrpgf----idykiPRDPVRFKKMLEYALEni-----gSCAEIRIDTWNDFY 522  Pyrococcus aby...
ZP_06243277  264 DPAVIFANgr--kfGKKIADMQYPKFDgtgqpwr-qtgvaqyGMDGRMLETTLLDSLKa-------KPDFIMLSSWNDWE 333  Victivallis va...
Feature 1        #                                           
4AD4_A       336 EGSQIEPavpytssef------tyldyenrePDYYLTRTAYWVG 373  Bacteroides xylanisolvens XB1A
AEJ61824     365 EGTVIEPteeygyrdleylqewrksveagfpFSKADLRIPLGIF 408  Spirochaeta thermophila DSM 6578
GAA88202     288 ESHYIGPiyepgmpdg------sskyvldcpHDAWRALLPHYIA 325  Aspergillus kawachii IFO 4308
NP_863991    478 EATAIFKctnnpprgrd----akfvtyeglpSDHYLKIVGRAAQ 517  Rhodopirellula baltica SH 1
P0C7J1       411 EGAVLEPda--------------------rlGYAWLDATRQALT 434  Xanthomonas campestris pv. campestris
NP_125780    523 EGTYVEPse---------------------nEEFKFLNTLRNLL 545  Pyrococcus abyssi GE5
ZP_06243277  334 EGANFEPgwdfd--------------gfagdPYTYCKVIAHLKG 363  Victivallis vadensis ATCC BAA-548

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