Conserved Protein Domain Family
CE4_GT2-like

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cd10962: CE4_GT2-like 
Catalytic NodB homology domain of uncharacterized bacterial glycosyl transferase, group 2-like family proteins
This family includes many uncharacterized bacterial proteins containing an N-terminal GH18 (glycosyl hydrolase, family 18) domain, a middle NodB-like homology domain, and a C-terminal GT2-like (glycosyl transferase group 2) domain. Although their biological function is unknown, members in this family contain a middle NodB homology domain that is similar to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily. The presence of three domains suggests that members of this family may be multifunctional.
Statistics
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PSSM-Id: 200584
Aligned: 14 rows
Threshold Bit Score: 276.865
Created: 13-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to other CE4 superfamily members

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ##                                                 #   #                 
NP_845761    295 KQVVLTFDDGPDPKYTPEILDILKEnkIKAAFFVLGenaqlNPSIVKRIYDEGHEIGNHTFKHPNVAdtsLLRTKVELNT 374  Bacillus anthr...
ACO32543     508 KEVALSFDDGPDPTWTPKILHVLNQyhVKATFMVIGeeavnNVGVLKREWRDGMEIGNHTYTHPDISlisRRQVALQLNL 587  Acidobacterium...
ABG09461     149 RHLMLTFDDGPDVEFTTQVLDILSRekIPATFFVLGsqvvlHPDVFRRMIREGHMAGNHTMFHVDFDehtDFRNRQEIIA 228  Mycobacterium ...
YP_612543    368 RKVVLTFDDGPHPVFSEQILDILQEtqTPATFFVTGksvmnAPEVLNRMIDEGHEIGAHTFSHPRMDqvsKTRATLEYAM 447  Silicibacter s...
AEH63000     477 GMIALTFDDGPDQKWTPKILDILKKehAPATFFIIGenaltNRNLLLREIKEGHEVGNHTYTHPNLGmasANSTIIEVNA 556  Zymomonas mobi...
EGN58203     499 KDLLLTFDDGPDYRWTPRVLSTLKKyhAPAAFFMVGlqmekNLPLVRRVYDEGYTIGNHTFTHHNMIensDARTYAELKL 578  Prevotella mul...
ADW17702     490 DGVVLTFDDGPDRKWTPKILDILKErgVKATFFMIGanmenHPDLVRRIVGEGHMIGVHTYSHPNIAlvsEERAHLEYNA 569  Desulfobulbus ...
EEB70856     492 KSILLTFDDGPTKEHTQDVLDILADaeVPATFFMIGnqmfeHKSVVNAMAQNDYDFGLHTFSHPQLDrssPNRVQVELAL 571  Ruegeria sp. R11
ZP_08512808   63 NKIYLTFDDGPDPVYTPQILDLLKKygITCTFFLMGervreHPHIVKRILDEGHAIGNHTYTHPYMVllnEKELNEELSR 142  Paenibacillus ...
NP_627186     91 HRLVLTFDDGPDPTWTPRVLDVLKKhdAHAVFFVTGtmasrYPDLVERMVDEGHEVGLHTFNHPDLSfqsEKRIDWELSQ 170  Streptomyces c...
Feature 1                          ###                           #                               
NP_845761    375 TQRLIQEitGHSTVLFRPPYEadanpdsSNEILPILRAq-nMNYTMVAEk--VDPEDWAtps---tnELVKRALNPvy-- 446  Bacillus anthr...
ACO32543     588 TERLFAAelGVDPLYFRPPYSidqnpdtNDEAAPAYFVq-kMGYIIVGDq--IDTNDWNehprktpqEIADSVLSQlqqm 664  Acidobacterium...
ABG09461     229 TDRVMRAtaAYASRLFRIPRGd-----pDNNTLALLQSq-qLGYLQVDQd--IDTLDWKvsp---enEVAVPQLDG---- 293  Mycobacterium ...
YP_612543    448 LDKVVAGaaGRQLTLYREPFQrsggpvtADRVAALEIAw-dRDMQVVGMd--VVPHDWAgws---grEIADFAIEEve-- 519  Silicibacter s...
AEH63000     557 TQRLFQAftGHSLRLFRAPFFgdaepttADEIDPVYAAq-kLGYLSVGLh--VDPNDWQrpk---kdEIIERVMEQvkqa 630  Zymomonas mobi...
EGN58203     579 TRMLLESvtGQSTILFRAPYNadadptqHEEIEPMILAs-rRDYLFVGEe--VDPNDWElgv--sadQIYHRVIDGvh-- 651  Prevotella mul...
ADW17702     570 TQRLIESitGHSTTLFRPPYNadtnphdPEELVPIALAq-aMGYVTVTEd--IDPEDWAepg---veTMLERIQQGrs-- 641  Desulfobulbus ...
EEB70856     572 QSRMFSWltGKTPVVFRAPYMrgp-gplEGEMARRLKAvidQRYHLLGAd--IVPPDWRdls---prELVDYTIEQld-- 643  Ruegeria sp. R11
ZP_08512808  143 TDEAMRDavGFAPVLFRPPYGl-----lNQGDIDLVRA---RGYEIMMWseeFEMFDWSfpg---vdNMVRLIEEKt--- 208  Paenibacillus ...
NP_627186    171 NQLAITGaaGVRTSLFRPPYSsfa-damDNKSWPVTEYiggRGYLVVVNn--TDSEDWKkpg---vdEIIRRATPKg--- 241  Streptomyces c...
Feature 1                   # #                                    
NP_845761    447 ----kgEGNIILLHDAGGNRTh-TVEALPIIIKELKKhGYSFVTISDLMN 491  Bacillus anthracis str. Ames
ACO32543     665 kttpwmRGSIILMHDGGGNRSa-TVAALPLLINTLRArGYKFVQVSDLMG 713  Acidobacterium capsulatum ATCC 51196
ABG09461     294 ------RGHVVLLHDGGGDRSa-TVRMLEQLIAEAKSkGYTFSTLAPLLS 336  Mycobacterium sp. JLS
YP_612543    520 ----rgAGNVILLHDGGEDRTa-SVEATRLIITELSAkGYEFTTVADLTG 564  Silicibacter sp. TM1040
AEH63000     631 --tsqhSAQIVLLHDSGGDRTq-TIAALPDIIHQLRAnGYKLVLVSDLIN 677  Zymomonas mobilis subsp. mobilis ATCC 10988
EGN58203     652 ----rgDGHIILLHDAGGVTRkpTLAALPRIIRTLQHeGYHFISLEKYLG 697  Prevotella multisaccharivorax DSM 17128
ADW17702     642 -----qGGSVVLLHDAGGDRSq-TVAALPAIIDYLQArGDRVLSLPELVG 685  Desulfobulbus propionicus DSM 2032
EEB70856     644 -----gSGQVLLLHDGGGERSn-TVAALALLIPELKArGYEFISLKEAMA 687  Ruegeria sp. R11
ZP_08512808  209 -----eAGSIILLHDGGGNREe-TVRTVEKVVPLLLErGFHFASDYLEQS 252  Paenibacillus sp. HGF7
NP_627186    242 -----gKGAIVLMHDSGGDRHq-TVQALDRFLPDLKKkGYEFDNLTEALD 285  Streptomyces coelicolor

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