2HQT,2UZ8,2HRA,2HSN,2HRK,2HRK


Conserved Protein Domain Family
GST_C_AaRS_like

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cd10289: GST_C_AaRS_like 
Click on image for an interactive view with Cn3D
Glutathione S-transferase C-terminal-like, alpha helical domain of various Aminoacyl-tRNA synthetases and similar domains
Glutathione S-transferase (GST) C-terminal domain family, Aminoacyl-tRNA synthetase (AaRS)-like subfamily; This model characterizes the GST_C-like domain found in the N-terminal region of some eukaryotic AaRSs, as well as similar domains found in proteins involved in protein synthesis including Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 2 (AIMP2), AIMP3, and eukaryotic translation Elongation Factor 1 beta (eEF1b). AaRSs comprise a family of enzymes that catalyze the coupling of amino acids with their matching tRNAs. This involves the formation of an aminoacyl adenylate using ATP, followed by the transfer of the activated amino acid to the 3'-adenosine moiety of the tRNA. AaRSs may also be involved in translational and transcriptional regulation, as well as in tRNA processing. AaRSs in this subfamily include GluRS from lower eukaryotes, as well as GluProRS, MetRS, and CysRS from higher eukaryotes. AIMPs are non-enzymatic cofactors that play critical roles in the assembly and formation of a macromolecular multi-tRNA synthetase protein complex found in higher eukaryotes. The GST_C-like domain is involved in protein-protein interactions, mediating the formation of aaRS complexes such as the MetRS-Arc1p-GluRS ternary complex in lower eukaryotes and the multi-aaRS complex in higher eukaryotes, that act as molecular hubs for protein synthesis. AaRSs from prokaryotes, which are active as dimers, do not contain this GST_C-like domain.
Statistics
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PSSM-Id: 198322
Aligned: 42 rows
Threshold Bit Score: 60.019
Created: 1-Apr-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
proteinprotein
Conserved site includes 15 residues -Click on image for an interactive view with Cn3D
Feature 1:protein interface 1 [polypeptide binding site]
Evidence:
  • Comment:Protein interface 1 is a surface used by GST-fold domains to bind other GST-fold domains in this subfamily, to facilitate complex formation.
  • Comment:Protein interface 1 corresponds to the same interacting surface used in classical GST dimerization.
  • Comment:Saccharomyces cerevisiae Arc1p uses this interacting surface to bind methionyl-tRNA synthetase.
  • Structure:2HSN; Interface between the N-terminal GST-fold domains of Saccharomyces cerevisiae MetRS and Arc1p; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ### ###### ##            #  #     ##                                           
2HQT_A        26 QSAQAAQWESVLKSg-------qIQPHLDQLNLVLRDNTfivstlYPTSTDVHVFEVALPLIKdlvasskdvkstyttYR 98  baker's yeast
NP_004981    103 LVVQGKKGEDVLGSv--------RRALTHIDHSLSRQNCpflageTESLADIVLWGALYPLLQdpay-------lpeeLS 167 human
Q13155       229 NATLIDSWVDIAIFqlkegsskeKAAVFRSMNSALGKSPwla-gnELTVADVVLWSVLQQIGGcsv----------tvPA 297 human
2HSN_B        24 QSAQAAQWESVLKSg-------qIQPHLDQLNLVLRDNTfivstlYPTSTDVHVFEVALPLIKdlvasskdvkstyttYR 96  baker's yeast
NP_001042706  75 QAAYVDQWLDYAPVils---gseFEAACSFLDGYLASRTflv-syGLSIADIVVWSNLAGTGQrwesl-----rrskkYQ 145 Japanese rice
XP_002984997  75 TASQVDEWLDYSPKfsa---gaeFEECCHYVNSYLAMRTflv-gyTTTVADITIWSSLAGGGKrwesm-----kksakFP 145 Selaginella moe...
ABR18375      75 ATAQIDEWVEYATVfsa---gaeFEKSCTYVDNHLSLRTflv-gySLSVADIAVWSGLAGTGQrwesi-----rkskkFQ 145 Sitka spruce
XP_003074488  97 ETEAVMEWVTRSGDlap---gggFEAQCKSVNEYLATRTylv-ghDVTLADLALWGELSTNRQwpvve------kkggCE 166 Ostreococcus tauri
AAC13597      86 INMKIDEWVDYASVfss---gseFENACGRVDKYLESSTflv-ghSLSIADVAIWSALAGTGQrwesl-----rkskkYQ 156 thale cress
XP_003056394  80 SSTMVDFWIDQASAavr---ggsFQEICERVAAYLSSHTylv-gcTLTIADLAFFHQLLNSRQweaik------trpsLG 149 Micromonas pusi...
Feature 1                    
2HQT_A        99 HILRWIDYMQNL 110 baker's yeast
NP_004981    168 ALHSWFQTLSTQ 179 human
Q13155       298 NVQRWMRSCENL 309 human
2HSN_B        97 HILRWIDYMQNL 108 baker's yeast
NP_001042706 146 NLVRWFNSIADY 157 Japanese rice
XP_002984997 146 HLSRWYDAISVD 157 Selaginella moellendorffii
ABR18375     146 NLVRWFNSILSE 157 Sitka spruce
XP_003074488 167 NVSRWMSAMNAD 178 Ostreococcus tauri
AAC13597     157 SLVRWFNSILDE 168 thale cress
XP_003056394 150 HLLRWFNSCMMN 161 Micromonas pusilla CCMP1545

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