2PKE,3DDH


Conserved Protein Domain Family
HAD-like

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cd07515: HAD-like 
Click on image for an interactive view with Cn3D
uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily
The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Statistics
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PSSM-Id: 319817
Aligned: 8 rows
Threshold Bit Score: 168.366
Created: 8-Apr-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #####                                                                       
2PKE_A         15 LVGFDGDDTLWKSEdyyrtaeadfeailsgyldlgdsrxqqhllaverrnlkifgygakgxtlsxietaielteariear 94  Xanthomonas ca...
3DDH_A         10 VIAFDADDTLWSNEpffqevekqytdllkpygtskeisaalfqtexnnlqilgy--gakaftisxvetalqisngkiaad 87  Bacteroides th...
jgi:Rcas_4295  27 TIAFDADDTLWHNEhlysltqekfkrllapfqdaatierrlyatemrnlaffgy--gikgftlsmietaidltegrvgah 104 Roseiflexus ca...
CAM77850        3 LVAFDGDDTLWHNEplfwatqdrfkallepycppehlaerllatevanlglfgy--gikgfvlsmietaiqvsdgqvpnt 80  Magnetospirill...
NP_811093       7 VIAFDADDTLWSNEpffqevekqytdllkpygtskeisaalfqtemnnlqilgy--gakaftismvetalqisngkiaad 84  Bacteroides th...
YP_427392      37 VIGFDADDTLWHNEthfqemqralaaiisghtgettpiddplmaverrnlkkyg-ygakgfalsmietaleltdqrvsga 115 Rhodospirillum...
NP_421613      10 TVGVDADDTLWHCEslfrlsharflellsehgdpekieaqltavekrnlrvygy--gakgftlsmietalevtdglvdtr 87  Caulobacter cr...
YP_353764       7 TIAFDADDTLWQNEtfyrltqerfaallarhvekdrlherllaaerrnlgrygf--gikgfmlsmietaievteervpag 84  Rhodobacter sp...
Feature 1                                                  ##                           #         
2PKE_A         95 diqriveigratlqhPVEVIAGVREAVAAIaa--dyAVVLITKGDLFHQEQKIEQSGLsdlFPRIEVVSEKDPQTYARVL 172 Xanthomonas ca...
3DDH_A         88 iirqivdlgksllkxPIELLPGVKETLKTLketgkyKLVVATKGDLLDQENKLERSGLspyFDHIEVXSDKTEKEYLRLL 167 Bacteroides th...
jgi:Rcas_4295 105 eirqiidfardmvraPVELLPGVRETIASLsa--syRLMVITKGDLFDQESKIARSGIadyFQHIEIVSEKTPETYAAVM 182 Roseiflexus ca...
CAM77850       81 viqeliergkhmlahPVHLLDQVAEAVAAVkag-ghRVMVITKGDLMDQEAKLARSGLadlFAAVEVVSEKDEALYRRLF 159 Magnetospirill...
NP_811093      85 iirqivdlgksllkmPIELLPGVKETLKTLketgkyKLVVATKGDLLDQENKLERSGLspyFDHIEVMSDKTEKEYLRLL 164 Bacteroides th...
YP_427392     116 eiariiamvhrfldgDIHILDGAVETLTRLrh--nhRLILITKGDEIEQQEKLAKSKLrsfFDTVYVVLEKDPDTYRSIL 193 Rhodospirillum...
NP_421613      88 vireilavgremltePIEPLPGVENALSALsd--ryRLILITKGDLLHQEQKLASSGLgdyFVAVEIVSEKDADTYRRVF 165 Caulobacter cr...
YP_353764      85 vigeiiaagqemlahPIELLDHAREAVEALaa--dyRVLLVTKGDLLDQERKLAQSGLgdmFHAVEIVSDKNARVYDRIF 162 Rhodobacter sp...
Feature 1                      ##   ##                                    
2PKE_A        173 SefdlpaerFVXIGNSlRSDVEPVLAIGGWGIYTPYa-----vTWAHEQDHGVAAD 223 Xanthomonas campestris pv. campestris
3DDH_A        168 SilqiapseLLXVGNSfKSDIQPVLSLGGYGVHIPF-------EVXWKHEVTETFA 216 Bacteroides thetaiotaomicron
jgi:Rcas_4295 183 RryhiepprFLMVGNSlKSDILPVVAVGGNAVYIPYhl---twEHERVTDEGVNAG 235 Roseiflexus castenholzii DSM 13941
CAM77850      160 AkhgsgceaCVMVGNSvRSDILPVLAAGGWAVHIPYagpvwahERAEPPVDHPRYA 215 Magnetospirillum gryphiswaldense MSR-1
NP_811093     165 SilqiapseLLMVGNSfKSDIQPVLSLGGYGVHIPFevm--wkHEVTETFAHERLK 218 Bacteroides thetaiotaomicron VPI-5482
YP_427392     194 GreaidpghFVMVGNSlRSDIHPVLAIGGRAILIPYevt--wkHEMVELPADAPKA 247 Rhodospirillum rubrum ATCC 11170
NP_421613     166 DrygtgaeqAVMAGNSmRSDVLPALDAGCWGALIPYplv-wshEAADAPLGHPRYV 220 Caulobacter crescentus CB15
YP_353764     163 RrhgdgperALMVGNSlKSDVLPPIEAGGFGVHVPHglt-walEHADPPDGHPRFF 217 Rhodobacter sphaeroides 2.4.1

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