2GLF,1Y7E,2GLJ


Conserved Protein Domain Family
M18_API

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cd05659: M18_API 
Click on image for an interactive view with Cn3D
M18 peptidase aminopeptidase I
Peptidase M18 family, aminopeptidase I (vacuolar aminopeptidase I; polypeptidase; Leucine aminopeptidase IV; LAPIV; aminopeptidase III; aminopeptidase yscI; EC 3.4.11.22) subfamily. Aminopeptidase I is widely distributed in bacteria and eukaryotes, but only the yeast enzyme has been characterized to date. It is a vacuolar enzyme, synthesized as a cytosolic proform, and proteolytically matured upon arrival in the vacuole. The pro-aminopeptidase I (proAPI) does not enter the vacuole via the secretory pathway. In non-starved cells, it uses the cytoplasm to vacuole targeting (cvt) pathway and in cells starved for nitrogen, it is targeted to the vacuole via autophagy. Yeast aminopeptidase I is active only in its dodecameric form with broad substrate specificity, acting on all aminoacyl and peptidyl derivatives that contain a free alpha-amino group; this is in contrast to the highly selective M18 mammalian aspartyl aminopeptidase. N-terminal leucine and most other hydrophobic amino acid residues are the best substrates while glycine and charged amino acid residues in P1 position are cleaved much more slowly. This enzyme is strongly and specifically activated by zinc (Zn2+) and chloride (Cl-) ions.
Statistics
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PSSM-Id: 349909
Aligned: 8 rows
Threshold Bit Score: 711.075
Created: 18-Apr-2007
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:H D E E D HClick to see conserved feature residue pattern help
Evidence:
  • Comment:Thermotoga maritima aminopeptidase has two manganese ions bound rather than zinc ions, and may be active as a multimer.
  • Structure:2GLF: Thermotoga maritima aminopeptidase binds two Mn(II) ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
2GLF_D        11 RKKEEIEAFSKEYXEFXSKAKTERXTVKEIKRILDESGFvpledf----agdpxNXTVYAVNRgKAIAAFRVVDdl-krG 85  Thermotoga mari...
1Y7E_A        13 EEKNQILNFSESYKKFISKFKTEREVTAYALDKAKKLGFinaeek----knlxpGDKIFYTCReKSVAFAIIGKnpiedG 88  Lyme disease sp...
NP_973187     17 AELSELGKLSDSYLDFLDNGKTERECTVEIIKQAKKHGFksleevv-ksgsakkGTKVYLNNKeKSVVLMVLGDdi-tqG 94  Treponema denti...
YP_012096     20 TDAAAMNDLATRYVDFLSRCKTERETIDYVVERLRTAGYten----------faHDRVYRVFKgKTVFIARKGRqplsqG 89  Desulfovibrio v...
YP_429005     30 GTREKVFAFAEGYKGFLSRAKTEREAIRAALEAARGRGFislndip-sgrgldpGSRFFLTWRdKVMLLGIAGTapleeG 108 Moorella thermo...
EBA40572      13 QQVEELEELCRGYKQFLSENKTERLCVKTGIKMAEEAGYvdletviaegrelkaGDKVYAANHgKDLMLVNLGTaplgqG 92  Collinsella aer...
2GLJ_A        15 KQLKEVFALGDRFKNFISNCKTERECVTELIKTAEKSGYrniedilakgetlkeGDKVYANNRgKGLIMFLIGKeplytG 94  Clostridium ace...
YP_001087556  18 NTIEQIMQYSSNYMEFLSKSKTERLSVKEIIKLAKENNYisideam-ekgsiscGDKIYVINKeKAVALFVIGKnyiekG 96  Clostridioides ...
Feature 1              #                                                                         
2GLF_D        86 LNLVVAHIDSPRLDFKPNPLIEDeqIALFKTHYYGGIKKYHWLSIPLEIHGVLFKNdGTEIEIHIGDKPeDPVFTIPDLL 165 Thermotoga mari...
1Y7E_A        89 XNFIVSHTDSPRLDAKPSPISEEneLTFIKTNYYGGIKKYQWLSTPLSIRGVVFLKnGEKVEINIGDNEnDPVFVIPDIL 168 Lyme disease sp...
NP_973187     95 MNIIGAHIDSPRLDLKQMPLFEEsnMAFLKTHYYGGVKKYQWTTIPLAIHGVIFTKeGKKVDICIGEDEkDPVLFINDLL 174 Treponema denti...
YP_012096     90 MRLIGAHADTPRLDLKQRPLQEQagVGQAKTHYYGGIRKYQWLARPLAIHGVVVREdGTTVQVTLGEDVtEPVFTIADLL 169 Desulfovibrio v...
YP_429005    109 IRLVGAHVDAPRLDLKPMPLYEKdgLAMFKTHYYGGIKKYQWTALPLALHGVIMLRdGRRVEVVIGEDAgDPIFSVSDLL 188 Moorella thermo...
EBA40572      93 FNILGAHVDSPRLDLKQNPAFEAgdMAYLDTHYYGGVKSYHWVASPLALVGVICKKdGTTVDINIGDKAdDPVFTISDLL 172 Collinsella aer...
2GLJ_A        95 FKILGAHIDSPRLDLKQNPLYEDtdLAMLETHYYGGIKKYQWVTLPLAIHGVIVKKdGTIVNVCVGEDDnDPVFGVSDIL 174 Clostridium ace...
YP_001087556  97 MKIIGSHIDSPRLDLKPNPLYQEsnLGFFKTHYYGGIKKYQWTAIPLALHGIVILNdGTKVDISIGEEDsDPVFCVTDLL 176 Clostridioides ...
Feature 1                                                                                        
2GLF_D       166 PHLDKEdaki---sekfKGENLXLIAGTIplsge--------------ekeaVKTNVLKILNEXYGITEEDFVSGEIEVV 228 Thermotoga mari...
1Y7E_A       169 PHLDRKiqrnkksdeivEGENLKILIGSLpietk--------------eknkVKLATLQLIKEKYKIEEEDFVSSEIEIV 234 Lyme disease sp...
NP_973187    175 IHLSKKqlqet-msegiTGEQLNILVGNQkpsskekkd-----dkkeesknpVKDNILKILNEKYGIIEEDFRVAELEVV 248 Treponema denti...
YP_012096    170 PHLAQKqsgqt-vadafEAEKLNIVMGHRpqpkpetagdeadakdapeakdpIKARVLALLHEKYAIREEDLYSAELQAV 248 Desulfovibrio v...
YP_429005    189 PHLAKEqmkkn-meealSGDDLNLVVGSLpfegee------------elkdkIRLAILQLLNQRYGLVEEDFITAELELV 255 Moorella thermo...
EBA40572     173 IHLSSEqmskp-akdavDAEILDVIVGGRpvkfdedd--------kdapkepVKQMFLDILKEQYDVEEEDFLSAEIEVV 243 Collinsella aer...
2GLJ_A       175 VHLASEqlekk-askviEGEDLNILIGSIplkdg-------------eekqkVKHNIMKILNEKYDISEEDFVSAELEIV 240 Clostridium ace...
YP_001087556 177 IHLAGDqmqkk-lsegiSGEALNILIGNIplede--------------ekepITANILKILNEKYNIVEEDLLSAEIEVV 241 Clostridioides ...
Feature 1                            #                              ##                           
2GLF_D       229 PAFSPREVGXDRSLIGAYGQDDRICAYTALRALLSAn--PEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQIlkxqg- 305 Thermotoga mari...
1Y7E_A       235 PAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLeetPNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDXifkikk 314 Lyme disease sp...
NP_973187    249 PAGKARNVGFDSSLIAGHGHDDRVCAYTSLKAILEVe-sPKRTAVALFADKEEIGSVGNTGMQALYFENMVAEIaalnk- 326 Treponema denti...
YP_012096    249 PAGPARFVGLDGSLVGGYGQDDRICVFAALEALLNAe-nPAAPQCVLFWDKEEIGSEGSTGAKSKFFEYCVEDLiqsw-- 325 Desulfovibrio v...
YP_429005    256 PAGPARDLGLDRSLVGAYGQDDRVCAYTALQAVLELe-nPGHTALVLLVDKEEIGSTGNTGAHSRFLEYALTELaarmg- 333 Moorella thermo...
EBA40572     244 PAGPARDMGLDRSMILGYGHDDRVCAYPSMLAQINVt-nVERTSITLIVDKEEIGSVGATGMTSRFFENTVAEImmlag- 321 Collinsella aer...
2GLJ_A       241 PAGKARDYGFDRSMVMGYGQDDRICAYTSFEAMLEMk-nAKKTCITILVDKEEVGSIGATGMQSKFFENTVADImslcg- 318 Clostridium ace...
YP_001087556 242 PAGKARDLGLDRSMVLGYGHDDRVCSYAAVKAILETe-qPEFTSVALCVDKEEIGSKGNTGMHSKFFENTVAELialeg- 319 Clostridioides ...
Feature 1                            #                                                           
2GLF_D       306 akdseFVLDEVLENTSVISGDVCAAVNPPYKdvhdlhNAPKlGYGVALVKYTGarGKYSTNDAHAEFVARVRKVLNEQGV 385 Thermotoga mari...
1Y7E_A       315 seynnLHVQKALWNSKSISADVCAAINPLFSsvhdeqNAPQlGYGIPIXKYTGhgGKSMASDADAELVSYIRQLLNKNNI 394 Lyme disease sp...
NP_973187    327 -nyrdIDVRRAFANSYMLSADVSAGFDPAFPsvfekmNSAYiGNGICINKYTGsgGKGGSNDANAEFLQRIRKIFDDNKV 405 Treponema denti...
YP_012096    326 --qpaARFSDVMLNTRAVSADVHAALDPDWQelheklNAATmGHGPVFCKFTGhrGKYEANDAHPEYVGWLRGVLNERGI 403 Desulfovibrio v...
YP_429005    334 -sasiVNVGRIMANSQAISADVTAGVDPTYEnyfdmyNASFlGYGVVLNKYSGsrGKYDANDASAEFMGRLRDIFNHNRV 412 Moorella thermo...
EBA40572     322 -edspLALRRALARSRMLSSDVSAGFDPGYAgkfetkNAAFmGRGLCFNKYTGsrGKGGSNDADAEYVALVRDIMDEAGV 400 Collinsella aer...
2GLJ_A       319 -dydeLKLRKALYNSEMLSSDVSAAFDPNYPnvmekrNSAYlGKGIVFNKYTGsrGKSGCNDANPEYIAELRRILSKESV 397 Clostridium ace...
YP_001087556 320 -dycdIKVRRALANSKVLSADVSAGYDPNFGeayekrNSAYmGNGVVLTKYTGsrGKSGCNDANAEFMSEVKGIFNKGNV 398 Clostridioides ...
Feature 1                                               #                       
2GLF_D       386 IWQVATLGKVDqgGGGTIAKFFAerGSDVIDXGPAlLGXHSPFEISSKADLFETYVAYRSLXE 448 Thermotoga maritima
1Y7E_A       395 AWQVATLGKVEegGGGTVAKFLAgyGIRTIDXGPAvISXHSPXEITSKFDLYNAYLAYKAFYR 457 Lyme disease spirochete
NP_973187    406 VWQTAELGKIDagGGGTIAYIIAkyGAEVVDCGVPvLSMHAPFEILSKADLYMAYKAYRAFYK 468 Treponema denticola ATCC 35405
YP_012096    404 PWQMAELGKVDqgGGGTVAMYLAayGMDIIDFGPAvLSMHSPFELASVADLYATRLAYTAFLE 466 Desulfovibrio vulgaris subsp. vu...
YP_429005    413 IWQSGELGKVDagGGGTIAKFLAyfGLDVADCGPAlLSMHAPLEIASKVDIYMAYRAYGAFLA 475 Moorella thermoacetica ATCC 39073
EBA40572     401 DFQTCELGRVNagGGGTIAYIMAkyGMNVIDSGVAvLSMHALWEVANKADIYEAYRGYKAFIE 463 Collinsella aerofaciens ATCC 25986
2GLJ_A       398 NWQTAELGKVDqgGGGTIAYILAeyGMQVIDCGVAlLNXHAPWEISSKADIYETKNGYSAFLN 460 Clostridium acetobutylicum
YP_001087556 399 IWQTAELGKVDqgGGGTIAHILAnqGAEVIDCGVGvLNMHAPHEIVSKVDIYEMYKGYKAFFN 461 Clostridioides difficile 630

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