1E0S,2A5F


Conserved Protein Domain Family
Arf6

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cd04149: Arf6 
Click on image for an interactive view with Cn3D
ADP ribosylation factor 6 (Arf6)
Arf6 subfamily. Arf6 (ADP ribosylation factor 6) proteins localize to the plasma membrane, where they perform a wide variety of functions. In its active, GTP-bound form, Arf6 is involved in cell spreading, Rac-induced formation of plasma membrane ruffles, cell migration, wound healing, and Fc-mediated phagocytosis. Arf6 appears to change the actin structure at the plasma membrane by activating Rac, a Rho family protein involved in membrane ruffling. Arf6 is required for and enhances Rac formation of ruffles. Arf6 can regulate dendritic branching in hippocampal neurons, and in yeast it localizes to the growing bud, where it plays a role in polarized growth and bud site selection. In leukocytes, Arf6 is required for chemokine-stimulated migration across endothelial cells. Arf6 also plays a role in down-regulation of beta2-adrenergic receptors and luteinizing hormone receptors by facilitating the release of sequestered arrestin to allow endocytosis. Arf6 is believed to function at multiple sites on the plasma membrane through interaction with a specific set of GEFs, GAPs, and effectors. Arf6 has been implicated in breast cancer and melanoma cell invasion, and in actin remodelling at the invasion site of Chlamydia infection.
Statistics
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PSSM-Id: 206716
Aligned: 13 rows
Threshold Bit Score: 315.561
Created: 1-Sep-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                       ######            #  #                     #                  
1E0S_A      4 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 83  human
2A5F_A      5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 84  human
XP_761727   9 MGKIFGNKEMRILMLGLDAAGKTTILYKLKLNQSVTTIPTVGFNVETVQYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 88  Ustilago maydis 521
AAH64293    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 84  zebrafish
AAH90206    5 FSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 84  African clawed frog
AAM68535    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 84  fruit fly
NP_503011   5 LSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYYTGTQAL 84  nematode
CAB51340   13 FSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGL 92  fission yeast
AAW26519    5 FSKLFGNKEMRILMLGLDAAGKTTILYRLKLGSSVSTIPTVGFNVETVTYKNVKFNVWDVGGQEKIRPLWRHYFTGSQGL 84  Schistosoma japonicum
CAD71135   10 MAKLFGTKEVRVLMLGLDAAGKTTILYKLKLQDHVTTIPTVGFNVETVTLRNIKFNIWDVGGQDKIRPLWRHYYSGTQGL 89  Neurospora crassa
CAA27317    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGL 84  chicken
NP_014737   9 LGKLFGSKEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTAL 88  baker's yeast
CAG84695    5 VSKLFKNREMRILMLGLDNAGKTTILYKLKLGKASTTVPTVGFNVETVKHKNVSFAVWDCGGQERIRPLWRHYFTGTNAL 84  Debaryomyces hanse...
Feature 1                                          ## #                              ##       
1E0S_A     84 IFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLt-rIRDRNWYVQPSCATSGDGLY 162 human
2A5F_A     85 IFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLt-rIRDRNWYVQPSCATSGDGLY 163 human
XP_761727  89 VFVVDSQDRDRIDEARQELHRIIGDREMRDCLLLVFANKQDLPGAMSPAEVTEKLGLh-rMRDRSWFVHPSCATSGEGLY 167 Ustilago maydis 521
AAH64293   85 IFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLt-rIRDRNWYVQPSCATTGDGLY 163 zebrafish
AAH90206   85 IFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLt-rIRDRNWYVQPSCAASGDGLY 163 African clawed frog
AAM68535   85 IFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLt-rIRDRNWYVQPSCATSGDGLS 163 fruit fly
NP_503011  85 IFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKPHEIQDKLGLt-rIRDRNWYVQPSCASTGDGLH 163 nematode
CAB51340   93 IFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLd-kLKDRLWNVQPTCALTGDGLL 171 fission yeast
AAW26519   85 IFVVDSSDRDRIEEARQELHRIAADREMQDAVILVFANKQDLPNAMKPNEIQERLMLaklSQGRLWYVQPSIATTGEGLY 164 Schistosoma japonicum
CAD71135   90 IFVVDSADHNRIDEARVELHRIINDREMKDCLLLVFANKQDIAGAMTPQEVTEKLQLn-kLKDRIYAVQPTIAIDKAGLQ 168 Neurospora crassa
CAA27317   85 IFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLt-rIRDRNWYVQPSCATTGDGLY 163 chicken
NP_014737  89 IFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEVSDFLELeknLKNQPWCVIGSNALSGQGLV 168 baker's yeast
CAG84695   85 IYVVDSSDHTRLEESKTELLRVISDKELSGCLLIVLANKQDVPGAIKPKELIDRFDLhnlPGQHTWSVIPTVAIDGTGLI 164 Debaryomyces hanse...
Feature 1              
1E0S_A    163 EGLTWLTSN 171 human
2A5F_A    164 EGLTWLTSN 172 human
XP_761727 168 EGLSWLSQN 176 Ustilago maydis 521
AAH64293  164 EGLTWLTSN 172 zebrafish
AAH90206  164 EGLTWLTSN 172 African clawed frog
AAM68535  164 EGLIWLTSN 172 fruit fly
NP_503011 164 EGLTWLSQN 172 nematode
CAB51340  172 EGLAWLSQN 180 fission yeast
AAW26519  165 EGLTWLNAN 173 Schistosoma japonicum
CAD71135  169 EGFNWLSDN 177 Neurospora crassa
CAA27317  164 EGLTWLTSN 172 chicken
NP_014737 169 EGLSWISNN 177 baker's yeast
CAG84695  165 ETLNWISKH 173 Debaryomyces hansenii CBS767

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