1YW4,1YW6,2BCO


Conserved Protein Domain Family
M14_ASTE

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cd03855: M14_ASTE 
Click on image for an interactive view with Cn3D
Peptidase M14 Succinylglutamate desuccinylase (ASTE) subfamily
Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Statistics
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PSSM-Id: 349428
Aligned: 26 rows
Threshold Bit Score: 278.704
Created: 18-Oct-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteactive site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[H] [ED] [H]Click to see conserved feature residue pattern help
Evidence:
  • Comment:Metallocarboxypeptidases share the zinc binding motif HXXE...H, where the zinc ion is penta-coordinated to ND1 atoms of the histidines, OE1 and OE2 atoms of the glutamic acid, and to a water molecule in a slightly distorted tetrahedral manner.
  • Structure:1YW4_A: Chromobacterium violaceum succinylglutamate desuccinylase bound to zinc; contacts at 3.5A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                   #  #              
1YW4_A      6 SFLQHALsssd-traEWPLp------gGLAARWLApGCVELNGda-----rgADSVLLSCGVHGNETAPIEVVDGXLTDI 73  Chromobacterium vi...
Q02I61      6 KLLDLTLagre-pteKIQLta-----dGTRLHWLAeGALEVTPiga---rdnGVDLLLSAGIHGNETAPIELLERLIRKV 76  Pseudomonas aerugi...
1YW6_A      8 NFLALTLtgkkpvitEREIn-------GVRWRWLGdGVLELTPlt-----ppQGALVISAGIHGNETAPVEXLDALLGAI 75  Escherichia coli
Q7N2H1      2 DLLTLLL--------EKKLadhltfpeTINAHWLAeGVLQLIPhe-----egNRSLVISAGIHGNETAPIEILIQLLAQL 68  Photorhabdus lumin...
Q9ZC70      3 DFLAITLsgkppqviQGETv-------NLKWQWLGeGILTLVPhr-----syTQSVVISAGIHGNETAPIEILNQLVTDL 70  Yersinia pestis
Q6FCP8      3 HFLHSVLsqqfphalQGENh-------NFSWQWQDeGVICLTPhh-----gyEKSIVLSAGIHGNETAPIELLEHIYQDV 70  Acinetobacter sp. ...
Q39I23     16 DFLAFTLtgsapsatDGACaa-----gAVRWQWLGdGLLALEPaaaeaadtaRASVLVSAGVHGDETAPIELLSMLVRDL 90  Burkholderia sp. 383
B2VEK5      3 DFLQLTLsggqpeqkEGRNg-------LLRWRWLNvGILELTPlh-----svPRALVVSSGIHGNETAPVEIVEQLVNAL 70  Erwinia tasmaniens...
OOK81401    3 NLLALTLaeetperqEGEGp-------SFHWRWLGrGVLELTPtg-----eyDLSLLLSTGIHGNETAPVEIVDLLLRAL 70  Pedobacter himalay...
GAM19400    3 NLLQRTLssevpairEGQNan-----gLVSWRWLHeGIVEVTPkqh---cheDQSVVLSAGIHGNETAPIELLDRLVNDI 74  Acytostelium subgl...
Feature 1                                                                                    #
1YW4_A     74 AAGQLaLNCRLLVXFANLDAIRqGVRYGNYDXNRLFngaharhpelpESVRAAELETLAAEFFaga----raRKLHYDLH 149 Chromobacterium vi...
Q02I61     77 AAGTLkPAARVLFLFGNPEAIRrGERYVEQDMNRLFngrhe-egsgnEAFRAAELERLAQVFFskt----erVHLHYDLH 151 Pseudomonas aerugi...
1YW6_A     76 SHGEIpLRWRLLVILGNPPALKqGKRYCHSDXNRXFggrwqlfaesgETCRARELEQCLEDFYdqg---kesVRWHLDLH 152 Escherichia coli
Q7N2H1     69 AEGTLaLKNNVLIIFGNLPAMRtNRRYLHDDLNRMFggrylnfplgnERSRAAELENVVNRFFaepsvsstnIRWHIDLH 148 Photorhabdus lumin...
Q9ZC70     71 LAGQLpLSVRLLVLLGNPPAIRkGKRYLSNDINRMFggryqhytpsdETRRASTLEQRVMAFFqas---htsERLHYDLH 147 Yersinia pestis
Q6FCP8     71 FQASLtLNVRLLLVLGNPNAIRtGQRYIEYDMNRMFcggyqqlepsvETQRAERLEQHVQIFFeqgc--staKRYHYDLH 148 Acinetobacter sp. ...
Q39I23     91 ASGALpLACRLLVVLGNVPAMRaGERYLDDDLNRLFsgrhaqvpdsrEAPRATQLEAAAAAFFaaap--agaARWHIDMH 168 Burkholderia sp. 383
B2VEK5     71 LRGELaLQARLLVIYGNPAALRlNRRYVHGDMNRMFggrwqqyedcpEARRAWILEQAMDNFWqagd--yeeVRWHLDLH 148 Erwinia tasmaniens...
OOK81401   71 FRAEItLHCRLLVVLGNPPALAqNKRYLVSDINRMFggrwaqfpqsdETTRAQWLEKVVTAFFaga----geTRWHLDLH 146 Pedobacter himalay...
GAM19400   75 MNGQIpLAVRMLAIIGNPMAVRsDQRYIKADMNRMFggrhskfepseETARAQLLESVVRDFInt-----stTCIHLDMH 149 Acytostelium subgl...
Feature 1                                                                                     
1YW4_A    150 TAIRGSvFEKFAIYPFLhdgrthKREQLAWLQRCGIEAVLLHTQPANTFSYFTSQYceADAFTLELGKARPFGQNDLSRF 229 Chromobacterium vi...
Q02I61    152 TAIRGSkIEQFALYPWAegr-ehSRSELARLRDAGIEAVLLQNKPGITFSAYTYGQlgAEAFTLELGKARPFGENQEVNL 230 Pseudomonas aerugi...
1YW6_A    153 TAIRGSlHPQFGVLPQRdi--pwDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHfgALACTLELGKALPFGQNDLRQF 230 Escherichia coli
Q7N2H1    149 TAIRAShHEQFALLPAQnr--pfSAEFMQWLHDSDIDALVYHREKAGTFSHFLSEKfgADSCTMEMGKAMPFGENDLTRF 226 Photorhabdus lumin...
Q9ZC70    148 TAIRGSyHPRFGLLPYQqt--pySAAMFRWLRDIELDALVMHTSAGGTFAHFSSERcqAASCTLELGKALPFGENQLSQF 225 Yersinia pestis
Q6FCP8    149 TAIRASlLPTFALLPHLeh--vhDPLLLNSLNAADLDAVVFHNTAGKTFSHFSGAYcqAASATLELGQAKPFGQNDLSQF 226 Acinetobacter sp. ...
Q39I23    169 TAIRASvFEQFALLPHTgm--ppTRTMFEWLGDAQIAAVLLHTAKGNTYSHFTAEHcgALACTLELGKVRPFGQNDLTRF 246 Burkholderia sp. 383
B2VEK5    149 TAIRGSyHAQFGVLPQRmt--pwPEDFMHWLASAGLEALVFHRATGGTFTNYSSRHfqAASCTLELGTALPFGHNDLTQF 226 Erwinia tasmaniens...
OOK81401  147 TAIRASyHVRFGVLPQRdq--pwDEAFLTWLGDAGLEALVFHQTPGGTFTHFTCENvgALSCTLELGKALPFGQNDLTRF 224 Pedobacter himalay...
GAM19400  150 TAIRQSlLPQFGVLPFNvpgtppNPKLLDLLDASGLDALVLHTEPGGAFTHYTGELtnASSCTLELGKALPLGHNNLDQF 229 Acytostelium subgl...
Feature 1                  
1YW4_A    230 SGIDGALRGLLSN 242 Chromobacterium violaceum
Q02I61    231 ERLERSLELLIDG 243 Pseudomonas aeruginosa UCBPP-PA14
1YW6_A    231 AVTASAIAALLSG 243 Escherichia coli
Q7N2H1    227 QKITDALYGLISL 239 Photorhabdus luminescens subsp. laumondii TTO1
Q9ZC70    226 SAITQGLRSLVSD 238 Yersinia pestis
Q6FCP8    227 VAIDRVLRVLIAD 239 Acinetobacter sp. ADP1
Q39I23    247 APADRAVRKLVSG 259 Burkholderia sp. 383
B2VEK5    227 AAVRLALRQLIAG 239 Erwinia tasmaniensis Et1/99
OOK81401  225 APTHQALRALLAG 237 Pedobacter himalayensis
GAM19400  230 TSYDQVMRSLVSG 242 Acytostelium subglobosum LB1

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