Conserved Protein Domain Family
SPFH_HflC

?
cd03405: SPFH_HflC 
High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
This model characterizes proteins similar to prokaryotic HflC (High frequency of lysogenization C). Although many members of the SPFH (or band 7) superfamily are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this SPFH domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflC is an integral membrane protein which may localize to the plasma membrane. HflC associates with another SPFH superfamily member (HflK) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection.
Statistics
?
PSSM-Id: 259803
Aligned: 196 rows
Threshold Bit Score: 191.547
Created: 4-Feb-2005
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P40606     19 SLFVIPEGERGIVVRFGRVLKdnndi-----triyEPGLHFKMPLf----DRVKQLDARIQTMDGRADRFVTS-EKKDVI 88  Vibrio parahaemoly...
AEQ51960   21 SLFIVNEREQAIVMRFGEITRei-----------qEPGIYFKVPTdf--vETVQYIDKRLLRYDLERIRLQVS-GGQFYI 86  Pelagibacterium ha...
ABF53957   26 TVSIVPEDRQAVVLRVGEVYGtknaykpgeqfgrsGAGLLFTMPFa----DSVQLIDKRILGINMERQQVLST-DQQRLQ 100 Sphingopyxis alask...
ABQ68714   29 TVAIVPETKQALVVRFGKPDTvynayrpnedfgatGAGVIWKIPFi----DQITWIDKRVRDFDMERQSVLST-DQLRLE 103 Sphingomonas witti...
EJL31168   25 SVIVVPEDEQAVVVRTGKPVRvynpfidkadfgqtGAGVHFRMPLv----EQVIRIEKRLLSVDMQQQQVLST-DQQRLN 99  Novosphingobium sp...
NP_103039  22 SVFVVNARQQALVLRFGEIVDvk-----------tEPGIYFKAPFsffdaDTVQLIENRVLRFDLDNIRVQVS-GGKFYE 89  Mesorhizobium loti...
EDL48406   25 SAYVVPEEEQVVIVRTGEPVGtintp-----dgnmGAGLHWRWPFv----DKVVRIEKRLLDLEMNDEEVLSN-DQQRLL 94  Erythrobacter sp. ...
ABC64359   25 SIVFVGEDEQAVVLQGGEPVKtinkfnpdepfgatNAGIQWHLPLv----QRVQIVDRRILDLDMERQQVLTS-DQQRLQ 99  Erythrobacter lito...
YP_033870  23 SVFIVYPRQQVAIKRFGQIVKve-----------sDPGIYLKVPFv----DKRIVVDNRLLRYDVPTQSVQVR-GGAYYE 86  Bartonella hensela...
ADM09864   23 LFFTVQEDEQAVVLQFGAPVGepinv-----pgtnEAGLNMKLPW-----QNVILFDRKNLEFDLREAEEIIVrNEERLL 92  Parvularcula bermu...
P40606     89 IDSYVKWRIEDFgRYYLATGGGNsl------tAEALLERKVTDVLRSEIGAREIKQIVSgprnddvlpedassdevntea 162 Vibrio parahaemoly...
AEQ51960   87 VDAFITYRIVDPiRFRQSVLGSLq-------lAEQRIATRLESALRAVYGLREFDAALSe-------------------- 139 Pelagibacterium ha...
ABF53957  101 VDAFARFRITNPvRMYTAIRTEEr--------LQQQLATILGSSLRNELGKRTFATLLSa-------------------- 152 Sphingopyxis alask...
ABQ68714  104 VDAYARYRIVDPlRMAITAGSERr--------VEEALRPILGSSLRNELGKRPFASLLSp-------------------- 155 Sphingomonas witti...
EJL31168  100 VDAYARFRIVDPvKMVQTAGTTEr--------VTQQLEPILSSSVRQELGKRTFQSLLTa-------------------- 151 Novosphingobium sp...
NP_103039  90 VDAFIAYRISDPrVFRAAVSGQIe-------lAEARLRTRLDAALRRVYGLRDFEAALSe-------------------- 142 Mesorhizobium loti...
EDL48406   95 VNAYARFRITDPvRMVERAGSTEg--------VRTALEPILNSVLRQELGRRTFQAMLTa-------------------- 146 Erythrobacter sp. ...
ABC64359  100 VDAYARFRIIDPiEMVRNARTEGn--------VANQLAPILTSVLRQELGRRTFASLLTa-------------------- 151 Erythrobacter lito...
YP_033870  87 VDAFFIYRITDPkLFLQRIASGRpq-----iaARENLAPRFIDALRAVYGKREFKAALSd-------------------- 141 Bartonella hensela...
ADM09864   93 VDAFVRYEIENPlLYLQTLGATSqdknqmrnvLNDRLTRILSEAMRDRLGSRTISQIIDd-------------------- 152 Parvularcula bermu...
P40606    163 arealeidgERDLIMSDVLRDtrESAMKDLGVRVVDFRMKKINLPD-EISESIYRRMRAERESVARKHRsQGREKAEIIR 241 Vibrio parahaemoly...
AEQ51960  140 ---------QRSEMMREASDLv-ATDMTELGIEVVDVRVLVTDLTP-EVSQQTYERMQAERNAEAALIRaRGQEQAQILR 208 Pelagibacterium ha...
ABF53957  153 ---------ERGAVMDNIQVAl-NREAQKYGAAIIDVRIKRADLPEgATLEAAYNRMRTARQQEAISIRaEGQKEAQIIR 222 Sphingopyxis alask...
ABQ68714  156 ---------ERGQVMDNIQTRl-NRVARQYGAEIVDVRIKRADLPDgTPLDSAFNRMRTAREQEARSILaEGRKQAQIIT 225 Sphingomonas witti...
EJL31168  152 ---------ERGQAMENIRKSl-DNEAREYGAQIVDVRIKRADLPE-GALAAAFVRMEAARQEEAKTVAaRGQRDAQIIR 220 Novosphingobium sp...
NP_103039 143 ---------QRAVMMREVRDQl-RPDATSLGLQIEDVRIRRTDLTA-EVSQQTYDRMKAERLAEAARLRaRGNEAAQRIT 211 Mesorhizobium loti...
EDL48406  147 ---------ERGSALQNVRANl-DRQAQQYGAEVVDVQITRTDLPE-APLQSAFTRMESDRQREARTIRaQGGRDARIIR 215 Erythrobacter sp. ...
ABC64359  152 ---------ERGNAMTNIRDIl-DRQARQYGAQVLDVRIKRADLPDgTPLEAAFTRMQSDRQEEAETIRaQGRRDAQIIR 221 Erythrobacter lito...
YP_033870 142 ---------ERGAMMAEVQRQf-SVDAGSLGITIVDVRIRKTDLTD-AVSEDVYRQMAAEREAVAENIRaRGQQERDRIV 210 Bartonella hensela...
ADM09864  153 ---------DRAEIMQLISQDv-IVEARELGINVIDVRIRQADFPA-ENAAQVNQRMISDYNQQAELIRaRGEERAREIR 221 Parvularcula bermu...
P40606    242 AQAELEVATilaeadktarvtrgeadaeaakIYANAYNKDPEFFSFLRSLRAYEKSFSSKNDIL 305 Vibrio parahaemolyticus
AEQ51960  209 AIADRQAVEvvsaanrdseiirgegdaeqnrLFAEAYSQDQSFFEFYRSMEAYRNALADGNTTM 272 Pelagibacterium halotolerans B2
ABF53957  223 GSADGEAAR----------------------IYAASFGKDPEFYDFYRAMQSYRQTFLGENNEG 264 Sphingopyxis alaskensis RB2256
ABQ68714  226 AEADAQAAG----------------------TYAESFNKDPDFYNFYRAMQSYRMTFGTDGTEA 267 Sphingomonas wittichii RW1
EJL31168  221 ADAEAQAAN----------------------IYAEAFGKDPAFYDFYRAMQSYAVSFGKGDGGK 262 Novosphingobium sp. AP12
NP_103039 212 ARADREVVEivaeaqkeseilrgegeaqrsaTFADAYKRDPAFFDFYRSMNAYGTALDNTGTTM 275 Mesorhizobium loti MAFF303099
EDL48406  216 AEADAEAAR----------------------IYADAFGKDANFYDFYRAMQSYDATFAAENGDA 257 Erythrobacter sp. SD-21
ABC64359  222 AEAEGQAAR----------------------IYATAYGKDPDFYDFYRAMQSYRTTFQNSESES 263 Erythrobacter litoralis HTCC2594
YP_033870 211 AEANREYEEivaaakrdaeitrgegqaesirLLLKAREANPSFYDFWLAMEQYKNLEHTPMVIS 274 Bartonella henselae str. Houston-1
ADM09864  222 AEADKEVVRvraeaeergqiirgradairncIFAGAYQGVEVNVQTIEPPEEVSGLGQEIAGEE 285 Parvularcula bermudensis HTCC2503
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap