1HE8,1C1Y,1NVX,1UAD,1X1R,1XTR,2A9K,2ATV,2ERX,3OES,1KAO


Conserved Protein Domain Family
Ras

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cd00876: Ras 
Click on image for an interactive view with Cn3D
Rat sarcoma (Ras) family of small guanosine triphosphatases (GTPases)
The Ras family of the Ras superfamily includes classical N-Ras, H-Ras, and K-Ras, as well as R-Ras, Rap, Ral, Rheb, Rhes, ARHI, RERG, Rin/Rit, RSR1, RRP22, Ras2, Ras-dva, and RGK proteins. Ras proteins regulate cell growth, proliferation and differentiation. Ras is activated by guanine nucleotide exchange factors (GEFs) that release GDP and allow GTP binding. Many RasGEFs have been identified. These are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active GTP-bound Ras interacts with several effector proteins: among the best characterized are the Raf kinases, phosphatidylinositol 3-kinase (PI3K), RalGEFs and NORE/MST1. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins. Due to the presence of truncated sequences in this CD, the lipid modification site is not available for annotation.
Statistics
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PSSM-Id: 206642
Aligned: 47 rows
Threshold Bit Score: 187.348
Created: 4-Feb-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Structure:1HE8: Human Ras binds GppNHp, a GTP analog and Mg2+, defined using 3.5 A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #######             #  #                         #                       
1HE8_B      5 KLVVVGAVGVGKSALTIQLiqnhfvdeYDPTIe-DSYRKQVVIDgeTCLLDILDTAGqee--------ysaMRDQYMRTG 75  human
2ERX_B      5 RVAVFGAGGVGKSSLVLRFvkgtfresYIPTVe-DTYRQVISCDksICTLQITDTTGshq--------fpaMQRLSISKG 75  human
Q96D21     21 RMVVLGASRVGKSSIVSRFlngrfedqYTPTIe-DFHRKVYNIRgdMYQLDILDTSGnhp--------fpaMRRLSILTG 91  human
AAF57410    8 RLVLLGGAGVGKSSIVKRFlfktytdkYRATVe-DLYNREYDLGgvTLKVDILDTSGdmq--------fpaMRRLSIATA 78  fruit fly
AAH76894    6 QVAVLGAPGVGKTSIVRRFvaqefpeeYIPTEhrELHRASAVLSgrLYELHILDVPNmqrypgtagqewmdPRFRGLRNS 85  western clawed frog
AAU45401   12 RLVFLGAAGVGKTALIRRFlldt-fepKHRRTveELHSKEYEVSgaTVTLEILDTSGsys--------fpaMRKLSIQNS 82  chicken
EAL44899    9 KLVALGKINSGKTSILIRFfsghffkmYDPGIe-DEYRTVMKVDdiSIIIDVADPCSgde--------fsiLRDLYIKQS 79  Entamoeba histolyt...
EAL45317    8 KIVLLGSGSVGKSAIATRYvkntfigrYDPTIe-ETFSKTIEIDgtTVQLEIYDTAGteq--------frtLQDLYMKEG 78  Entamoeba histolyt...
EAL46827    8 KIVLLGPAFVGKSAIAFRFtkntfisgYEPTIe-QTFNKTIEFDgkQVRLDVYDTAGseq--------frtLLELYIKEG 78  Entamoeba histolyt...
EAL50591    9 SVVLLGDHGVGKSSVAIRFatnvfmseYSIHPk-QIQVSRVSVDgtDYDIGVIDTNAtm----------tiQNDDLIMKG 77  Entamoeba histolyt...
Feature 1                                                     ## ##                           
1HE8_B     76 EGFLCVFAINNTKSFEDIHQYREQIKRvkds--------ddvPMVLVGNKCDLAa--RTVESRQAQDLARSYg----iPY 141 human
2ERX_B     76 HAFILVYSITSRQSLEELKPIYEQICEikgd-------vesiPIMLVGNKCDESp-sREVQSSEAEALARTWk----cAF 143 human
Q96D21     92 DVFILVFSLDNRESFDEVKRLQKQILEvksclknktkeaaelPMVICGNKNDHGelcRQVPTTEAELLVSGDen---cAY 168 human
AAF57410   79 HAFMLVYAATSAPSFQCVKQCFEEIREqrgd-------fqdiPIVIAGNKADLAtthREVKLEEVTDWVFCElprlraKV 151 fruit fly
AAH76894   86 RAFILVFDICSPESFHHVKLLRQQILDstn---------kspLIVVVGNKRDQQk-hRFAPRHVLSVLVKKSwk---cGY 152 western clawed frog
AAU45401   83 DAFALVYAVDDAESFESIKSLREEILEvked--------kfpPIVVVGNKAESGg-eRQVPAEDALSLVELDwn---sRF 150 chicken
EAL44899   80 DGFILIYSITSKESFEEMKGIYEEIYRvkdkd-----eneviPIIIVGNKCDLEn-eRQVTKEDGIEYADSVk----cPF 149 Entamoeba histolyt...
EAL45317   79 DGFILVFSLVSVATFNDLSSIYGHINEvknsm-----ekkfvPIVIAGNKCDLDn-rTVTTEQAQEFANNNGc-----HF 147 Entamoeba histolyt...
EAL46827   79 DGFILVYAVDDNASFNGIKCIYNDIVNittsmndgvvpltlpPILIAGNKCDLDd-kVVKNEEVQEFCNTHGc-----DF 152 Entamoeba histolyt...
EAL50591   78 DAFVVMYSVTNKNSFLHLPLYLNRIYElrkdh------sktiPIIIVGNKCDEKr--REVIYESGQLFSDSIs----cLF 145 Entamoeba histolyt...
Feature 1        ##                 
1HE8_B    142 IETSAKTRQGVEDAFYTLVREI 163 human
2ERX_B    144 METSAKLNHNVKELFQELLNLE 165 human
Q96D21    169 FEVSAKKNTNVDEMFYVLFSMA 190 human
AAF57410  152 LECSAKEDSNVTDLFKSLLSLS 173 fruit fly
AAH76894  153 LECSARSNWHILLLFKELLISA 174 western clawed frog
AAU45401  151 VETSAKDNENVLEVFRELLQQA 172 chicken
EAL44899  150 LECSAKTNENINQIFDIITRNV 171 Entamoeba histolytica HM-1:IMSS
EAL45317  148 METSAKTQKNINEMFEYLTRQL 169 Entamoeba histolytica HM-1:IMSS
EAL46827  153 LETSAKRNENIDQIFALLARRL 174 Entamoeba histolytica HM-1:IMSS
EAL50591  146 METSALDYTNINHLFDIIIREW 167 Entamoeba histolytica HM-1:IMSS

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