Conserved Protein Domain Family
seleno_YedE

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TIGR04112: seleno_YedE 
putative selenium metabolism protein, YedE family
For 79 of the first 80 reference genomes in which a member of this protein family, YedE, is found, a selenium utilization system is found, spread over a broad taxonomic range (Firmicutes, spirochetes, delta-proteobacteria, Fusobacteria, Bacteriodes, etc. This family is less widespread than YedF, also involved in selenium metabolism.
Statistics
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PSSM-Id: 274988
Aligned: 31 rows
Threshold Bit Score: 380.005
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_02440828   40 KMIGAGLIIGIIAAVLVLLGNPKNMGFCIACFIRDTAGAVGLHQAAAVQYIRPEIIGLVLGAFVIAAVKKEFLPRGGSSP 119 Anaerotruncus c...
ZP_06113587    9 TLALSGVMLGITAAALAFFGNPKNMAICIACFIRDTAGAMKLHQAAVVQYVRPEIAGIVAGAFLISLITKEYRSTAGSSP 88  Clostridium hat...
ZP_02093488   15 GLLTLGIIAGLGAALLAYLGNPKNMAFCIACFIRDTAGAMKFHNAEVVQYFRPEIVGIIVGAFLISLFTKEYRSTAGSSP 94  Parvimonas micr...
ZP_03728608    5 KIIISGILVGLLGVLLVRFGNPANMGVCVACFVRDISGGLGFHRAEVVQYLRPEVSGFIIGAFIISMFSGEFRARGGSSP 84  Dethiobacter al...
ZP_01665743    5 LMLATGVVFGLGAVLLVKLGNPGNYGFCAACHLRDIAGALGIHQAATLQYARPEVLGWVLGAFGMAKASGQFRPRGGSRP 84  Thermosinus car...
YP_383538      9 MVVAAGLLLGGLGALLAVWGNPENSGICVSCFIENSAGALGMHDNPRMQYLRPELIGFVLGAMASALLFREFRSRGGSAP 88  Geobacter metal...
WP_012064635   7 KVIASGGVIGLLAAILVKFGNPVNMGICVACFFRDIAGGLGLHRAAVVQYLRPEVPGFILGSFAMAKAKGEFKPRGGSSP 86  Alkaliphilus me...
WP_011392953  10 fMIMTGFVGGALAAFMTYLGNPANMGICIACFYRDIAGALGLHRAAIVQYLRPEIMGIALGAFLSALVFGEFRARGGSAP 89  Moorella thermo...
WP_011641472   7 YVLTVGLLIGAIAVTLVKLGNPPNMGFCIACFERDIAGAIGLHRAGVVQYMRPEIIGLVLGALLASLFAGEFKSRGGSAT 86  Syntrophomonas ...
WP_013174244   7 LFAVTGVVIGGLAVLLVLSGNPANMGMCIACFLRDITGSLGLHRAGVVQYMRPEILGLSLGAFVTALGAREFRSRGGSAP 86  Syntrophothermu...
ZP_02440828  120 MTRFVLGFFVMITALVFLGCPFRMILRIAGGDLNAVVGIVGFAVGIFAGVQFLGRGYSLK--RT-Y--SVP-VIDGAWLS 193 Anaerotruncus c...
ZP_06113587   89 MIRFVLGMIMMTGALVFLGCPLRMLIRMSAGDLNAYVALAGFVGGVFTGTAALKRGFSLG--RS-Y--ESR-SASGYVLP 162 Clostridium hat...
ZP_02093488   95 VIRFFLGVIMMVCALVFLGCPLRMILRMSAGDISSYVGFVGFVAGVATGAFFLRKGFSLG--RA-Y--PIK-KENGYVLP 168 Parvimonas micr...
ZP_03728608   85 LLRFLIGMAVMIGALVFLGCPLRMVLRLAAGDFNAVIGLLGFIFGIFVGVQFLKRGFSLG--RS-Q--RIH-NGNGIAIP 158 Dethiobacter al...
ZP_01665743   85 MVRFILGMTMMIGALVFLGCPLRAILRLAAGDLNGITGLAGFAAGIGAGIYFLKQGFNLG--RA-RlhSAAgSLAGYLAA 161 Thermosinus car...
YP_383538     89 LPRLFAGIFLMVGCGVFIGCPIKLFLRLTAGDLTAVAGVAGLVAGVWAGLRGLANGVEPG--QT-S--RGQ-GHGGPLIP 162 Geobacter metal...
WP_012064635  87 LLRFILGFFLMIGALVFLGCPLRMILRLANGDLNAILGLLGYVAGIWIGIQFLKGGFTLG--KS-I--KQP-AVSGYTMP 160 Alkaliphilus me...
WP_011392953  90 LVRFFLGAFFMIGALVFLGCPVRAVLRLAGGDLNAVAGLAGVVAGALMGIYFLKRGFNLG--RW-Q--STY-TAAGWLMP 163 Moorella thermo...
WP_011641472  87 FVRFILGVFMMIGALVFLGCPLRDVLRMAGGDYNAVVGFIGFIFGVGTGVFFLKRGFNLG--RAeY--SHS-QAGGLVLP 161 Syntrophomonas ...
WP_013174244  87 FVRFFLGMFMMIGALMFLGCPLRDILRISGGDLNAVVGLFGFVSGVLWGVFFLRQGFNLGaaRL-E--PTT-QAGGYLFV 162 Syntrophothermu...
ZP_02440828  194 VIQVVFFALLCAApAY-------ILFSESGPGSMRAPVWISLAAGLIVGALAQRTRLCMVGGIRDVLLFK-DWTLLAGFA 265 Anaerotruncus c...
ZP_06113587  163 VLLVLILILSVTT-SL-------MAVSEKGPGSMHAPVLIALVGGLVFGAVSQKCRTCFAGSFRDVILMK-NFDLITIIG 233 Clostridium hat...
ZP_02093488  169 VVVAVLFVLSIAVpSL-------YVFSKKGPGSMHAIWYGALVVGLLFGVIAQRSRMCFAGSIRDIILVK-DFRLISVIA 240 Parvimonas micr...
ZP_03728608  159 GLALVLLILVIVApAF-------IFFSASGPGFARAPFLISLGAGVLIGVLVQRSRLCQIGCFRDMMLIG-DSHLLYGSL 230 Dethiobacter al...
ZP_01665743  162 AVALGLVLAVLVKsPL-------LNFSAKGPGSLHAPVWASLAAGLAAGALAWRTRMCLSGGIRDFLLVG-DTYLLKIYG 233 Thermosinus car...
YP_383538    163 AFFILLLVFLLIRpGF-------ILFSTQGSAAQHAPVPLALGAGVVLGALAQRSRFCITGSIRDVFLMGkRTPALWGML 235 Geobacter metal...
WP_012064635 161 VFVVILLIFLVTApSF-------IYFSEAGPGSMVAPISIALAAGLIVGAMLQRTRLCTAGGIRDILLIK-DFHYFWGLI 232 Alkaliphilus me...
WP_011392953 164 LFMLGLLLLAIARpSF-------IFFSKEGPGAAHALLGVSLAAGLIIGFLAQRTRMCFVGGWRDLFLVK-DTYLFSGIV 235 Moorella thermo...
WP_011641472 162 LIMAFFLFLLLKAtVFnpdaggpLFFSAEGPGSMYAPLAFSLGAGLLVGILAQRVRLCLSGGIRDFMLIR-DNTLLLGFI 240 Syntrophomonas ...
WP_013174244 163 ALVTVMLFLLVAGiNFnpeaggpLFFSKEGPGSMHAPIWIALAAGLVIGFLAQRARLCLSGGFRDFFLIR-ETGMLLAYG 241 Syntrophothermu...
ZP_02440828  266 AILAAALVSNAVLNtmfggY--FKVGFMGQPVAHIDGLWNFLSMSAVGLGSVLLGGCPMRQLILAGEGNSDSAVTVAGFF 343 Anaerotruncus c...
ZP_06113587  234 AFFAVMLLFNMVTG-----G--FKLSFDGQPVAHAQHLWNILGMYVVGFAAVLAGGCPLRQLVLAGQGSSDSAVTFLGMF 306 Clostridium hat...
ZP_02093488  241 GIFIVMLGYNIATN-----N--FKFVAFG-PIAHAQTIWNLLSMYAVGFCAVLLGGCPLRQLVLAGTGSSDSVITVLGMF 312 Parvimonas micr...
ZP_03728608  231 AIFAAALVGNLVLG-----Y--FNPGFVDQPVAHTAGLWNFIGLAVVGLGATLLGGCPIRQTILAGEGDTDAGMTFLGLL 303 Dethiobacter al...
ZP_01665743  234 VMFLAALAGNMYFG-----F--FKLGFINQPLAHTMHIWNFLGLFVTGLAATLAGGCPLRQLIMAGEGNTDAMICVLGML 306 Thermosinus car...
YP_383538    236 AFLAAAVAANLATG-----R--FNPGLHGQPGAHLEHLWSFLGMGLTGWISVLIGGCPFRQLIKAGEGDADAGLVVVGMF 308 Geobacter metal...
WP_012064635 233 GIFVFALLGNLLFN-----FetFKIGFEGQPIAHNAHLWNFLGMALAGVCAVFLGGCPLRQSILAGEGDIDATVTIFGLM 307 Alkaliphilus me...
WP_011392953 236 AFFAGALVVNAILG-----K--INIGFAGQPVAHTNQLWNFLGMTLAGLTATLLGGCPLRQTVLAGEGDTDAGVAIMGML 308 Moorella thermo...
WP_011641472 241 GIFIGALLLNIALG-----F--FKTGFAPQPVAHTMHLWNFLGLYLVGMTATLLGGCPLRQLILSGEGDTDAAAVVVGMI 313 Syntrophomonas ...
WP_013174244 242 GILVTALILNIVFG-----K--FNLGFANQPVAHTNHIFNFLGLFLLGQCAVFLGGCPLRQIVMASEGDMDAAVAVAGMV 314 Syntrophothermu...
ZP_02440828  344 VGAAFAHNFGL------------ASAATavaed----gaitgGPTLAGKTVTILALIVMFAIAW 391 Anaerotruncus colihominis DSM 1...
ZP_06113587  307 IGAALCHNFGL------------AGAAAaaatdt--spaaagGPGTAGKAAVIICIAVLFAIGF 356 Clostridium hathewayi DSM 13479
ZP_02093488  313 VGAAFAHNFKL------------AGGAAavenaakgikaaagGPGINGQIFVIISIIALFIVAF 364 Parvimonas micra ATCC 33270
ZP_03728608  304 FGAAVAHNFGL------------AASPA--------------GVSQAGQAGVLLSAVFLLVVGF 341 Dethiobacter alkaliphilus AHT 1
ZP_01665743  307 VGAGIAHTLNT------------AASPA--------------GVAFNGQVAVSIALAVTAVIGW 344 Thermosinus carboxydivorans Nor1
YP_383538    309 IGGALVQSWGI------------AATAA--------------GVSLTGKVAILAGFASVLAASL 346 Geobacter metallireducens GS-15
WP_012064635 308 AGAAFAHNFGL------------AASPA--------------GVGLNGKVAVIVGFIVVIAIGY 345 Alkaliphilus metalliredigens
WP_011392953 309 AGAAFAHNFQL------------ASSPQ--------------GPGPYGPTAVIIGLVFAAGVGF 346 Moorella thermoacetica
WP_011641472 314 VGAAFCHNFMLasgamkaaaagvAASPG--------------GPGIYGQLACIVGIIVVAAIGF 363 Syntrophomonas wolfei
WP_013174244 315 AGAAVAHNFML------------AASPK--------------GPTGFGEIAVIAGILIVSLIGW 352 Syntrophothermus lipocalidus
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