Conserved Protein Domain Family
rnfB

?
TIGR01944: rnfB 
electron transport complex, RnfABCDGE type, B subunit
The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the B subunit. [Energy metabolism, Electron transport]
Statistics
?
PSSM-Id: 273887
Aligned: 8 rows
Threshold Bit Score: 191.164
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q8KA20         2 SITIILIFSILSFLLGIILSYVKYIFPIKKNSIIAEVDDLLPQSQCAQCGYSGCYPYAKAIVKnNEN-IDKCIPGGNNLK 80  Buchnera aphidi...
Q07394         1 MIAAAASMSALGLGLGYLLGAAARKFHVETPPIVEEIAKILPGTNCGACGFPGCNGLAEAMAE-GNApVTACTPGGRDVA 79  Rhodobacter cap...
Q9KT87         4 IVIAVIALAALAAVFGAILGFASIRFKVEADPIVDQIDAILPQTQCGQCGYPGCRPYAEAIAN-GDA-INKCPPGGQATI 81  Vibrio cholerae...
P77223         4 IWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCnGEK-INRCAPGGEAVM 82  Escherichia col...
Q9HYB9         4 VFLAIGALLPICLAGGALLGYAAVRFRVQGDPVAEQVNALLPQTQCGQCGYPGCKPYAEAIAA-GDK-INKCPPGGEATI 81  Pseudomonas aer...
WP_011712370   4 AVSAVMSLGGMALFAGLGLGYAAKKFHVEADPVVEKLEALLPATNCGMCGHPGCGPYAQAITE-GEA-INLCTPGGKAVM 81  Magnetococcus m...
WP_010893073   7 YPAAHRIP--------CNLTHT-MSTPHP-LTLVERIDRLLPQTQCGQCGFQGCLPYAQAMAR-GEAnIDRCPPGGDAGA 75  Xylella fastidiosa
WP_011000958   1 -----------------------MVSLAP--SLADRLEDLLPQTQCTKCGYNGCRPYAEAMAR-GEAlPNRCPPGGAEGI 54  Ralstonia solan...
Q8KA20        81 FKIAKVLNIKnikysldnLNAKNEK---NIHTTVLIDEKNCVGCSKCASFCPVDAIIGTPNFMHTVLQKFCTGCNICLLH 157 Buchnera aphidi...
Q07394        80 LALAEIVTVE--------AGADAGPiaeIEPMVAFVFEDHCTGCQKCFKRCPTDAIVGGAKQIHTVVMDACIGCDACIEV 151 Rhodobacter cap...
Q9KT87        82 EKLADLMGVEvq-----dSAHDLDN---KVKMVAFIHEDMCIGCTKCIQACPVDAIVGGNKAVHTVIKNECTGCDLCVAP 153 Vibrio cholerae...
P77223        83 LKIAELLNVEpq-----pLDGEAQEi-tPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDP 156 Escherichia col...
Q9HYB9        82 RALADLLDLEpe-----pLDAAEET----PPRVAYIREAECIGCTKCIQACPVDAIVGAARLMHTVIADECTGCDLCLEP 152 Pseudomonas aer...
WP_011712370  82 ESIAAMLGVSpa-----aMDDEG-------PKVAYIDEEACIGCTACIKVCPVDAIVGANKQSHTVIVAECTSCQLCLEP 149 Magnetococcus m...
WP_010893073  76 HALAHLLGVPpr-----pYDRSHGTq--QQPQVAWIVEADCIGCTKCIQACPVDAIIGGAKHMHTVIAALCTGCELCVPA 148 Xylella fastidiosa
WP_011000958  55 RRLSEALGRTgpl---laLDSAHGVe--QPRALALIDPERCIGCTLCIQACPVDAIVGAPKAMHVVLEDWCTGCDLCVAP 129 Ralstonia solan...
Q8KA20       158 CPTNCIKIIKE 168 Buchnera aphidicola str. Sg (Schizaphis graminum)
Q07394       152 CPTEAIVSRVK 162 Rhodobacter capsulatus
Q9KT87       154 CPTDCIEMIPV 164 Vibrio cholerae O1 biovar El Tor str. N16961
P77223       157 CPTHCISLQPV 167 Escherichia coli K-12
Q9HYB9       153 CPVDCIEMREI 163 Pseudomonas aeruginosa PAO1
WP_011712370 150 CPTDCITMQPV 160 Magnetococcus marinus
WP_010893073 149 CPVDCIELHPS 159 Xylella fastidiosa
WP_011000958 130 CPVDCIDMVPA 140 Ralstonia solanacearum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap