Conserved Protein Domain Family
A_thal_3678

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TIGR01568: A_thal_3678 
uncharacterized plant-specific domain TIGR01568
This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Statistics
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PSSM-Id: 130631
View PSSM: TIGR01568
Aligned: 8 rows
Threshold Bit Score: 101.29
Threshold Setting Gi: 13877677
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAK43916       165 VTQHVDSPDPLTDFRRSMQEMIDAAidagELSRDpndgYDFLDELLLTYLSLNPADTHKFVIRAFSDILVSLLS 238 thale cress
CAB78528       103 IMKHIESPDPYRDFGRSMREMVEARdltrDVVAD----REYLHELLFCYLYLNPKHTHRFIVSAFADTLLWLLS 172 thale cress
AAK73267       110 MLFSLESDDPYSDFKRSMEEMVEAH----ALHHD----WKSLEKLLLQFLKVNAKTSHRYIFAAFVDLLMNLAL 175 thale cress
BAB08986       148 VAVAMESEDPYGDFRRSMEEMVTSHg---ELAKD----WESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSD 214 thale cress
AAD55464       193 IAVLRYTDEPQEDFRQSMVEMMESKlgmrESEVD----WDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALRE 262 thale cress
TIGR:At2g18500 228 VAVVKKSEDPYEDFKGSMMEMIVEK----KMFEV-----AELEQLLSCFLSLNAKRHHRAIVRAFSEIWVALFS 292 thale cress
AAM14819       254 FAVMKRSVDPKKDFRESMIEMIEEN----NIRAS-----KDLEDLLACYLTLNPKEYHDLIIHVFEQIWLQLTK 318 thale cress
BAB08322        98 VAMAKESINPFEDYKKSMNQMIEER----YIETE-----SELKELLRCFLDINPSPQHNLIVRAFVDVCSHLQP 162 thale cress
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