4UMV


Conserved Protein Domain Family
ATPase-IB2_Cd

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TIGR01512: ATPase-IB2_Cd 
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heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori). [Transport and binding proteins, Cations and iron carrying compounds]
Statistics
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PSSM-Id: 273665
Aligned: 17 rows
Threshold Bit Score: 523.425
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4UMV_A       183 IETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPETATRL--------Rng--------- 245  Escherichia co...
NP_194740    140 INILVVVTVGATIGMQDYTEAAVVVFLFTIAEWLQSRASYKASAVMQSLMSLAPQKAVIA--------Et---------- 201  thale cress
WP_001158764 135 ENALMLIATIAAFCVGAYEESVSIMVFYSAGEFLQILAIARSKKSLKALVDVAPNLAYLK--------Kgd--------- 197  Helicobacter p...
WP_025192005  68 VDILAITAIVATLAVGEYWASLMILIMLTGGDSLEDYAAGKANQELKSLLDNSPQKAHRL--------Nge--------- 130  Enterococcus f...
WP_012727986  99 IDILMTSAAFGSIFIGGALEGALLLVLFAISESLGAMVSGKAKSTLASLKHLAPTVAWVV--------Q----------- 159  Chlamydia trac...
AIK86998      90 aDTLAAVSIITSVLLGEWLVAAIIVLMLSGGEALEEAASRRASGTLDALARRAPSTAHRLlgatildgT----------- 158  Corynebacteriu...
KEA09865      97 TDQLIALAMLGAWASGDLLTAALLPIIMIFGHVLEERSVIGSQEAIAALGELTRSHARRI--------Eadg-------- 160  Pseudomonas ae...
WP_003978713  79 VDLIAVLALGGTLAVGEYLAGVLIALMLATGRTLEGAAQRRASHDLHALLAHAPRSARRR--------Tgd--------- 141  Streptomyces l...
NP_195444    185 IHVLMALAAFASVFMGNALEGGLLLAMFNLAHIAEEFFTSRSMVDVKELKESNPDSALLI--------Evhngnvpnisd 256  thale cress
WP_031743395   3 VDLLMIAAAVGAVAIGQIFDGALLIVIFATSGALDDIATRHTAESVKGLLDLAPDQAVVV--------Qgdg-------- 66   Mycobacterium ...
4UMV_A       246 -erEE-----VAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLS 319  Escherichia co...
NP_194740    202 --gEE-----VEVDELKTNTVIAVKAGETIPIDGVVVDGNCEVDEKTLTGEAFPVPKLKDSTVWAGTINLNGYITVNTTA 274  thale cress
WP_001158764 198 -tlVS-----VAPEDLRINDIVVVKVGEKVPVDGVVIKGESLLDERALSGESMPVNVSERSKVLGGSLNLKAVLEIQVEK 271  Helicobacter p...
WP_025192005 131 -nlED-----VSVEEINVGDELVVKPGELVPVDGLVKTGTSTVDESSLTGESKPIEKNPGDELMSGSVNGDGSLKMVAEK 204  Enterococcus f...
WP_012727986 160 ---QDgslqkVLVQNVKVGEIIRVKSGEVVPLDGKIIQGASSINLMHLTGEKIPKSCGIGDTIPAGAHNLEGSFDLQVLR 236  Chlamydia trac...
AIK86998     159 ---EE-----IAVEEITVGDLVAVLPHELCPVDGEIVAGHGTMDESYLTGEPYVVSKSKGSQAMSGAVNGDTPLTIVATK 230  Corynebacteriu...
KEA09865     161 -slSE-----VDNASLRPGDQVEVRAGDRVPADGRVLQGQASLDTAPITGESVPLEVAPGMEVYGGAINLDGLLRIEITR 234  Pseudomonas ae...
WP_003978713 142 -gvVR-----VPLSEITAGDALVVGPGEVVPVDGRVESTEAVLDESVLTGEPLQVTRQRGEGARSGAVNAGGAFDLRATA 215  Streptomyces l...
NP_195444    257 lsyKS-----VPVHSVEVGSYVLVGTGEIVPVDCEVYQGSATITIEHLTGEVKPLEAKAGDRVPGGARNLDGRMIVKATK 331  thale cress
WP_031743395  67 -seRV-----VAASELVVGDRVVVRPGDRIPADGAVLSGASDVDQRSITGESMPVAKARGDEVFAGTVNGSGVLHLVVTR 140  Mycobacterium ...
4UMV_A       320 EPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPL-LFaaswq------ewiykGL-TLLLIG 391  Escherichia co...
NP_194740    275 LAEDCVVAKMAKLVEEAQNSKTETQRFIDKCSKYYTPAIILISICFVAIPFA-LKvhnlk------hwvhlAL-VVLVSA 346  thale cress
WP_001158764 272 LYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVLPPL-FSmgsfd------ewiyrGL-VALMVS 343  Helicobacter p...
WP_025192005 205 TVADSQYQTIVNLVKESAARPAHFVRLADRYAVPFTLVAYLIAGVAWFVSKS-PTr---------------FA-EVLVVA 267  Enterococcus f...
WP_012727986 237 IGAESTIAHIINLVVQAQSSKPKLQQRLDRYSSTYALTIFAISACIAIGGSL-FTtlpflgp---dsafyrAL-AFLIAA 311  Chlamydia trac...
AIK86998     231 LAHDSRYAQIVGVLHEAENNRPEMRRMADRLGAWYTVIALALGGLGWIVSGD-PVr---------------FL-AVVVVA 293  Corynebacteriu...
KEA09865     235 TGEASTLGKVIGLMQQAERAKPPITRLLERYAGQYMLLVLLIAAVTWFVTND-AQ----------------AMlAVLVAA 297  Pseudomonas ae...
WP_003978713 216 IEQDSTYAGIVRLAQQAGAESAPVVRLADRYAAWFLPLALATAALAWLVSGSaVR----------------AV-AVLVVA 278  Streptomyces l...
NP_195444    332 AWNDSTLNKIVQLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLGPF-LFkwpflstaacrgsvyrAL-GLMVAA 409  thale cress
WP_031743395 141 DPSQTVVARIVELVADASATKAKTQLFIEKIEQRYSLGMVAATLALIVIPLM-FGadlrp-------vllrAM-TFMIVA 211  Mycobacterium ...
4UMV_A       392 CPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAI------HP-------Atgi- 457  Escherichia co...
NP_194740    347 CPCGLILSTPVATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDF------QS-------Lsedi 413  thale cress
WP_001158764 344 CPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQTKSIAFDKTGTLTKGVFKVVDI------VP-------Qngh- 409  Helicobacter p...
WP_025192005 268 SPCPLILSAPIALVAGMGRSSRHGVVIKSGTMVEKLASAKTIAFDKTGTITQGQLSVDQV------QPinaeitsA---- 337  Enterococcus f...
WP_012727986 312 SPCALIIAIPIAYLSAINACAKHGVLLKGGVVLDRLVSCNSVVMDKTGTLTTGDLTCSGC------ED-------Fgpe- 377  Chlamydia trac...
AIK86998     294 TPCPLLIAVPVAIIGAISLAARRGIIVKNPGMLENASGVKTVMFDKTGTLTYGRPVITDI------HT-------Apgv- 359  Corynebacteriu...
KEA09865     298 CPCALVLSAPATAIAGIAVAARHGILIRSSAFLEELADLTSLVVDKTGTLTHGSLRLQAL------RLada-aeeA---- 366  Pseudomonas ae...
WP_003978713 279 TPCPLLLAAPVAVVSGLSRASRRGVVVRDGGALENLGRARTLLLDKTGTLTVGRPCVLDVvaapghVP-------A---- 347  Streptomyces l...
NP_195444    410 SPCALAVA-PLAYATAISSCARKGILLKGAQVLDALASCHTIAFDKTGTLTTGGLTCKAI------EP-------Iyghq 475  thale cress
WP_031743395 212 SPCAVVLATMPPLLSAIANAGRHGVLVKSAVVVERLADTSIVALDKTGTLTRGIPRLASV------AP-------Ldpnv 278  Mycobacterium ...
4UMV_A       458 ---sesELLTLAA-----------AVEQGATHPLAQA------------IV-----------------REaqvaelaipt 494  Escherichia co...
NP_194740    414 ---slqSLLYWVS-----------STESKSSHPMAAA------------VVdyarsvsv-epkpeaveDY---------- 456  thale cress
WP_001158764 410 ---skeEVLHYAS-----------CSQLLSTHPIALS------------IQkaceemlkddkhqhdikNY---------- 453  Helicobacter p...
WP_025192005 338 ------ELVGLAA-----------SVEQESSHILARS------------IV-----------------AYarkqdvplkn 371  Enterococcus f...
WP_012727986 378 ----spLFYSCVL-----------AMEQSSSHPIAQA------------IV-----------------NYltekqvrslp 413  Chlamydia trac...
AIK86998     360 ---eedTVLALAA-----------SVERYSRHPLADA------------IR-----------------DGakarelhlpd 396  Corynebacteriu...
KEA09865     367 ------SVLRLAA-----------SLGAASSHPVSRAlaalaahdayhpLS-----------------DI---------- 402  Pseudomonas ae...
WP_003978713 348 ------EVLRVAA-----------SLDQLSPHVLAQA------------IV-----------------DAartrrlelsa 381  Streptomyces l...
NP_195444    476 ggtnssVITCCIPncekealavaaAMEKGTTHPIGRA------------VV-----------------DHsvgkdlpsif 526  thale cress
WP_031743395 279 --vdarRLLQLAA-----------AAEQSSEHPLGRA------------IV-----------------AEarrrgiaipp 316  Mycobacterium ...
4UMV_A       495 aesqRALVGSGIEAQVNGERVLICA--------------------------A-----------------Gkhpadafagl 531  Escherichia co...
NP_194740    457 ----QNFPGEGIYGKIDGKEVYIGN--------------------------K-----------------Riasragclsv 489  thale cress
WP_001158764 454 ----EELSGMGVKAQCHTDLIIAGN--------------------------Ekmldqfhi-ahspspenG---------- 492  Helicobacter p...
WP_025192005 372 itdlAEVSGAGVKAFVDGAEIRVGK--------------------------Knfvtqes---qatekidK---------- 412  Enterococcus f...
WP_012727986 414 atqcTTIPGEGVSGEFNGEQAFVGRvstalryvpeeyreqlreraqqaqerG-----------------N---------- 466  Chlamydia trac...
AIK86998     397 vvevSERPGQGLTGTVGEHLVRITN--------------------------R-----------------Rstleidpdsk 433  Corynebacteriu...
KEA09865     403 ----RERQGFGVVARTAAGEAALGR--------------------------PelfqqlgidasevpeheG---------- 442  Pseudomonas ae...
WP_003978713 382 ptevTEEPGRGASGVVEGHRVFIGR--------------------------D-----------------D---------- 408  Streptomyces l...
NP_195444    527 vesfEYFPGRGLTATVNGVKTVAEE--------------------------S-----------------Rlrkaslgsie 563  thale cress
WP_031743395 317 akdfRAVPGCGVHALVGNDFVEIAS--------------------------Pqsyrgaplae------------------ 352  Mycobacterium ...
4UMV_A       532 -----------------inelesagqT---------------------VVLVVRN-DDVLGIIALQDTLRADAATAISEL 572  Escherichia co...
NP_194740    490 p---------------didvdtkggkT---------------------IGYVYVG-ETLAGVFNLSDACRSGVAQAMKEL 532  thale cress
WP_001158764 493 --------------------------T---------------------IVHVAFN-QTYIGYIVISDEIKDDAIECLRDL 524  Helicobacter p...
WP_025192005 413 --------------------------T---------------------TIHISRN-GTYLGRITFTDTVRPEAKETMEKL 444  Enterococcus f...
WP_012727986 467 --------------------------T---------------------CSIACL--GKRVSLFYFRDVPRHDAADIVSYL 497  Chlamydia trac...
AIK86998     434 -----------------nyipvtssgM---------------------ESVVLVD-DKYAALIRLRDEPRASASEFIAHL 474  Corynebacteriu...
KEA09865     443 --------------------------P---------------------IAGIALD-GRFLGWLLLADSVRAEAAEALADL 474  Pseudomonas ae...
WP_003978713 409 --------------------------PtrarpnwakavgnralldgasVAWLTVD-ERLTGAVLLRDALRRDAPHAVRRL 461  Streptomyces l...
NP_195444    564 fitslfksedeskqikdavnassygkD---------------------FVHAALSvDQKVTLIHLEDQPRPGVSGVIAEL 622  thale cress
WP_031743395 353 -----------------lapllsagaT---------------------AAIVLLD-GVAIGVLGLTDQLRPDAVESVAAM 393  Mycobacterium ...
4UMV_A       573 -NALGVkG-VILTGDNPRAAAAIAGELGl---EFKAGLLPEDKVKAVTKL---N----Qha--pLAMVGDGINDAPAMKA 638  Escherichia co...
NP_194740    533 -KSLGI-KiAMLTGDNHAAAMHAQEQLGnamdIVRAELLPEDKSEIIKQL---K----Ree-gpTAMVGDGLNDAPALAT 602  thale cress
WP_001158764 525 -KAQGIeNfCILSGDRKSATESIARTLGc---EYHASLLPEEKTSVFKTF---K----ErykapAIFVGDGINDAPTLAS 593  Helicobacter p...
WP_025192005 445 -HQLHLqRiLMLTGDQESVAETIAAEVGi--tEVHGECLPQDKLTILKEL---P----Ken-hpVIMVGDGVNDAPSLAA 513  Enterococcus f...
WP_012727986 498 -KKNGY-PvCMLTGDHRISAENTARLLGi--dEVFYDLTPDNKLSKIQELaksR----Q-----IMMIGDGINDAPALAQ 564  Chlamydia trac...
AIK86998     475 pKKHKVdKlMIISGDRASEVRYLADKVGi--dEVHAEASPEDKLNIVNRH---N----Ehg--aTMFLGDGINDAPAMAV 543  Corynebacteriu...
KEA09865     475 -RELGLgRqLLLTGDRRAVADAVAKQVGi--rQLVAQALPEDKLRQVGAE---IgsgfR-----PMVVGDGINDSLALKA 543  Pseudomonas ae...
WP_003978713 462 -RSAGIeRlVMLTGDRAATAQEVAAVLGl--dGVRAELGPADKVAAVRGE---R----Eha--vTVMVGDGVNDAPALAA 529  Streptomyces l...
NP_195444    623 -KSWARlRvMMLTGDHDSSAWRVANAVGi--tEVYCNLKPEDKLNHVKNI---A----ReagggLIMVGEGINDAPALAA 692  thale cress
WP_031743395 394 -AALTAaPpVLLTGDNGRAAWRVARNAGi--tDVRAALLPEQKVEVVRNL---Q----Agg-hqVLLVGDGVNDAPAMAA 462  Mycobacterium ...
4UMV_A       639 AAIGIAMG-SGTDVALETADAALTHNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTTLLGMTGLW---LAVLAD 714  Escherichia co...
NP_194740    603 ADIGISMGvSGSALATETGNIILMSNDIRRIPQAIKLAKRAKRKVVENVVISITMKGAILALAFAGHPLIW---AAVLAD 679  thale cress
WP_001158764 594 ADVGIGMG-KGSELSKQSADIVITNDSLSSLVKVLAIAKKTKSIIWQNILFALGIKAVFIVLGLMGVASLW---EAVFGD 669  Helicobacter p...
WP_025192005 514 ADVGIAMGaHGATAASETADVVILKDDLSKVSQAVEIAQDTMKIAKQSVLIGIFICVLLMLIASTGIIPAL---IGAMLQ 590  Enterococcus f...
WP_012727986 565 ATVGIAMGeAGSATAIEAADVVLLNQGLSSLPWLIDKAKKTRRIVSQNLALALAIILFISGPASMGVIPLW---LAVILH 641  Chlamydia trac...
AIK86998     544 ATVGVAMGaD-SDVTSEAADAVILDSSLERLDDLLHISARMRRIALQSAGGGMALSVVGMILAVFGFLTPL---MGAIFQ 619  Corynebacteriu...
KEA09865     544 GVVGVAMGaGGADIALASADIVLIGSDLRRLGTCVRLSRQCRRTLQVNVAIGLGWTLAIVAAAAFGLLGAAgamVAALLH 623  Pseudomonas ae...
WP_003978713 530 ADIGVAMGaRGTTASSEAADIVLTTDRVDRLADAVVIAQRSRRIAVQSALGGMLLSLGAMAAAALGLIQPA---AGALLQ 606  Streptomyces l...
NP_195444    693 ATVGIVLAqRASATAIAVADILLLRDNITGVPFCVAKSRQTTSLVKQNVALALTSIFLAALPSVLGFVPLW---LTVLLH 769  thale cress
WP_031743395 463 ARAAVAMG-AGADLTLQTADGVTIRDELHTIPTIIGLARQARRVVTVNLAIAATFIAVLVLWDLFGQLPLP---LGVVGH 538  Mycobacterium ...
4UMV_A       715 TGATVLVTANALRLLR 730  Escherichia coli O104:H4 str. 2009EL-2050
NP_194740    680 VGTCLLVILNSMLLLS 695  thale cress
WP_001158764 670 VGVTLLALANSMRTMR 685  Helicobacter pylori
WP_025192005 591 EVVDTVSILSALRARR 606  Enterococcus faecalis
WP_012727986 642 EGSTVIVGLNALRLLK 657  Chlamydia trachomatis
AIK86998     620 EVIDVLAILNSARVAL 635  Corynebacterium glutamicum
KEA09865     624 NLSTLLVLGNAGRLLR 639  Pseudomonas aeruginosa C1913C
WP_003978713 607 EGIDVAVILNALRALR 622  Streptomyces lividans
NP_195444    770 EGGTLLVCLNSVRGLN 785  thale cress
WP_031743395 539 EGSTVLVALNGMRLLT 554  Mycobacterium tuberculosis
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