Conserved Protein Domain Family
3A0103s03R

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TIGR01096: 3A0103s03R 
lysine-arginine-ornithine-binding periplasmic protein
[Transport and binding proteins, Amino acids, peptides and amines]
Statistics
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PSSM-Id: 273440
Aligned: 15 rows
Threshold Bit Score: 212.217
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q52812     8 AAIGAAVLAVGasAASATTLSDVKAkGFVQCGVNTGLTGFAAPDASGNWAGFDVDFCKAVASAVFgdpTKVKYTPTNAKE 87  Rhizobium leguminos...
P02910     3 KLALSLSLVLA--FSSATAAFAAIP-QKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRIN---TQCTFVENPLDA 76  Salmonella enterica...
P39182     3 KLVLSLSLVLA--FSSATAAFAAIP-QNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRIN---TQCTFVENPLDA 76  Escherichia coli
P09551     3 KSILALSLLVG--LSTAASSYAALP-ETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQ---VKCTWVASDFDA 76  Escherichia coli K-12
AAA75577   3 KTVLALSLLIG--LGATAASYAALP-QTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQ---VKCTWVASDFDA 76  Salmonella enterica...
AAC71070   3 KLALLGALALS--VLSLPTFAADKP---VRIGIEAAYPPFSLKTPDGQLAGFDVDIGNALCEEMK---VQCKWVEQEFDG 74  Pseudomonas aerugin...
P30860     2 KKLVLAALLAS--FTFGASAAEKIN-----FGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQ---AECTFTNHAFDS 71  Escherichia coli K-12
P30859     2 KKVLIAALIAG--FSLSATAAETIR-----FATEASYPPFESIDANNQIVGFDVDLAQALCKEID---ATCTFSNQAFDS 71  Escherichia coli K-12
P45091     2 KKTLLTAILLG--ASVAASAQELT------FAMQPSYPPFETTNAKGEIIGFDVDVTNAICQEIQ---ATCKFKSETFDA 70  Haemophilus influen...
P10344     2 KSVLKVSLAALtlAFAVSSHAADKK---LVVATDTAFVPFEFKQGD-KYVGFDVDLWAAIAKELK---LDYELKPMDFSG 74  Escherichia coli
Q52812    88 RFTALQSGEIDVLSRntTWTINRDTALGFNFRPVTYYDGQGFMVRKGLNVKSALE-LSGAAICVQSGTTTELNLADYFKT 166 Rhizobium leguminos...
P02910    77 LIPSLKAKKIDAIMS--SLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVAsLKGKRVGVLQGTTQETFGNEHWAP 154 Salmonella enterica...
P39182    77 LIPSLKAKKIDAIMS--SLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVEsLKGKRVGVLQGTTQETFGNEHWAP 154 Escherichia coli
P09551    77 LIPSLKAKKIDAIIS--SLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDsLKGKHVGVLQGSTQEAYANETWRS 154 Escherichia coli K-12
AAA75577  77 LIPSLKAKKIDAIIS--SLSITDKRQQEIAFSDKLYAADSRLIAAKGSPVQPTLEsLKGKHVGVLQGSTQEAYANDNWRT 154 Salmonella enterica...
AAC71070  75 LIPALKVRKIDAILS--SMTITDERKRSVDFTNKYYNTPARFVMKEGASLNDPKAdLKGKKAGVLRGSTADRYASAELTP 152 Pseudomonas aerugin...
P30860    72 LIPSLKFRKYDAVIS--GMDITPERSKQVSFTTPYYENSAVVIAKKDT--YKTFAdLKGKRIGMENGTTHQKYIQDQHP- 146 Escherichia coli K-12
P30859    72 LIPSLKFRRVEAVMA--GMDITPEREKQVLFTTPYYDNSALFVGQQGK--YTSVDqLKGKKVGVQNGTTHQKFIMDKHP- 146 Escherichia coli K-12
P45091    71 LIPNLKAKRFDAAIS--AIDITDARAKQVLFSDAYYDSSASYVALKGK--ATLES---AKNIGVQNGTTFQQYTVAETK- 142 Haemophilus influen...
P10344    75 IIPALQTKNVDLALAg--ITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKdLDGKVVAVKSGTGSVDYAKANIK- 151 Escherichia coli
Q52812   167 nnlQYNPVVFENLPEVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHIILPEIISKEplgpaVRQGDDqwfdivswtay 246 Rhizobium leguminos...
P02910   155 k--GIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPAVKDE-----KLFGVG----------- 216 Salmonella enterica...
P39182   155 k--GIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDE-----KLFGVG----------- 216 Escherichia coli
P09551   155 k--GVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDK-----KYFGDG----------- 216 Escherichia coli K-12
AAA75577 155 k--GVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDK-----KYFGDG----------- 216 Salmonella enterica...
AAC71070 153 a--GVEVVRYNSQQEANMDLVAGRLDAVVADSVNLEDGFLKTDAGKGYAFVGPQLTDA-----KYFGEG----------- 214 Pseudomonas aerugin...
P30860   147 ---EVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNEWLKTNPQ---LGVATEKVTDP-----QYFGTG----------- 204 Escherichia coli K-12
P30859   147 ---EITTVPYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPK---LAAVGDKVTDK-----DYFGTG----------- 204 Escherichia coli K-12
P45091   143 ---QYSPKSYASLQNAILDLKSGRIDIIFGDTAVLADMISKEPE---IQFIGEKVTNK-----KYFGNG----------- 200 Haemophilus influen...
P10344   152 ---TKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQ-FKAVGDSLEAQq--------------------- 206 Escherichia coli
Q52812   247 alinaeeFGITQANvdemknspnpdikrflgseTDtkigTDLGLTNDWAANVIKGVGNYGEIFERNI 313 Rhizobium leguminosarum bv. vici...
P02910   217 -------TGMGLRK-------------------ED----NELREALNKAFAEMRADGTYEKLAKKYF 253 Salmonella enterica subsp. enter...
P39182   217 -------TGMGLRK-------------------ED----NELREALNKAFAEMRADGTYEKLAKKYF 253 Escherichia coli
P09551   217 -------TGVGLRK-------------------DD----AELTAAFNKALGELRQDGTYDKMAKKYF 253 Escherichia coli K-12
AAA75577 217 -------TGVGLRK-------------------DD----TELKAAFDKALTELRQDGTYDKMAKKYF 253 Salmonella enterica subsp. enter...
AAC71070 215 -------VGIAVRK-------------------GD----SELAGKFNAAIDALRANGKYKQIQDKYF 251 Pseudomonas aeruginosa PAO1
P30860   205 -------LGIAVRP-------------------DN----KALLEKLNNALAAIKADGTYQKISDQWF 241 Escherichia coli K-12
P30859   205 -------LGIAVRQ-------------------GN----TELQQKLNTALEKVKKDGTYETIYNKWF 241 Escherichia coli K-12
P45091   201 -------LGIAMHK-------------------SN----KDLAAQLNKGLAAIKANGEYQKIYDKWI 237 Haemophilus influenzae Rd KW20
P10344   207 -------YGIAFPK-------------------GS----DELRDKVNGALKTLRENGTYNEIYKKWF 243 Escherichia coli
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