Conserved Protein Domain Family
lon_rel

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TIGR00764: lon_rel 
lon-related putative ATP-dependent protease
This model represents a set of proteins with extensive C-terminal homology to the ATP-dependent protease La, product of the lon gene of E. coli. The model is based on a seed alignment containing only archaeal members, but several bacterial proteins match the model well. Because several species, including Thermotoga maritima and Treponema pallidum, contain both a close homolog of the lon protease and nearly full-length homolog of the members of this family, we suggest there may also be a functional division between the two families. Members of this family from Pyrococcus horikoshii and Pyrococcus abyssi each contain a predicted intein. [Protein fate, Degradation of proteins, peptides, and glycopeptides]
Statistics
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PSSM-Id: 273259
Aligned: 4 rows
Threshold Bit Score: 759.383
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O58221   16 GIEFETTEEIPVPE-RLIDQVIGQDHAVEVIKTAAKQRRHVLLIGEPGTGKSMLGQAMAELLPTE-ELEDILVFPNPEDE 93   Pyrococcus horikosh...
O29883   11 GLDFESTKDVAVPE-RLIDQVIGQDHAVEAIKKAAVQKRHVMLIGSPGTGKSMLAKAMAELLPKE-ELEDILVYPNPQDP 88   Archaeoglobus fulgi...
O26878   28 TLSYETSKDIEVPE-RLIDQIIGQEEAVETIKKAAEQRRNVLLIGEPGVGKSMLAKAMAELLPRE-QLQDILVYPNIEDP 105  Methanothermobacter...
Q58812    3 SIKFKTTEELPEPSpRLIDQVIGQEEAVKIVLSAVKNKRNVILLGDPGVGKSMIVKAVGEILSDFgEFTPYYVIAKPNLK 82   Methanocaldococcus ...
O58221   94 NMPR-IKTVPAGQGRKIVEEYRRKAKEQEGVRFYLLFFVFFIVAMAVFLSHgdPNTLLLGVFVILVALMVTANMRFKTQA 172  Pyrococcus horikosh...
O29883   89 NQPK-IRLVPAGKGREIVEAYKEEAMKKAQARNFLIFTLVFLVIGYTVLTN--PGNLIWGIIAAVLILMMSRYFIPREDR 165  Archaeoglobus fulgi...
O26878  106 NNPL-IGAVPAGEGRKIVMNHKNKARSQDEKKNLFMMLIISFILVLGFMMN----QFLAAIIAAGIIFLALQQFRPRTTV 180  Methanothermobacter...
Q58812   83 NMERpIVEVIDGEYKEDSKDMPKLDFKAPSSTTLLLIMIGAILLSEYLLKYlpQNYLLAAVTITALIVLIFGFVIILTSI 162  Methanocaldococcus ...
O58221  173 M------VPKLLVDNSGR-------KRAPFVDATGAHAGALLGDVRHDPFQcfsgeeviivekgkdrkvvklrefvedal 239  Pyrococcus horikosh...
O29883  166 N------VPKLLVDNSDK-------VTAPFEDATGAHAGALFGDVRHDPFQ----------------------------- 203  Archaeoglobus fulgi...
O26878  181 M------VPKLLVNNEGR-------QVAPFVDATGAHAGALLGDVRHDPYQ----------------------------- 218  Methanothermobacter...
Q58812  163 MgasrasMPNNLNPMDLKpvllyecKKRPLVRASAYNVTRLLGDIKHCPLGg---------------------------- 214  Methanocaldococcus ...
O58221  240 kepsgegmdgdikvtykdlrgedvriltkdgfvkllyvnkregkqklrkivnldkdywlavtpdhkvftseglkeageit 319  Pyrococcus horikosh...
O29883      --------------------------------------------------------------------------------      Archaeoglobus fulgi...
O26878      --------------------------------------------------------------------------------      Methanothermobacter...
Q58812      --------------------------------------------------------------------------------      Methanocaldococcus ...
O58221  320 ekdeiirvplvildgpkiastygedgkfddyirwkkyyektgngykraakelnikestlrwwtqgakpnslkmieelekl 399  Pyrococcus horikosh...
O29883      --------------------------------------------------------------------------------      Archaeoglobus fulgi...
O26878      --------------------------------------------------------------------------------      Methanothermobacter...
Q58812      --------------------------------------------------------------------------------      Methanocaldococcus ...
O58221  400 nllpltsedsrlekvaiilgalfsdgnidrnfntlsfisserkaierfvetlkelfgefnyeirdnheslgksilfrtwd 479  Pyrococcus horikosh...
O29883      --------------------------------------------------------------------------------      Archaeoglobus fulgi...
O26878      --------------------------------------------------------------------------------      Methanothermobacter...
Q58812      --------------------------------------------------------------------------------      Methanocaldococcus ...
O58221  480 rriirffvalgapvgnktkvklelpwwiklkpslflafmdglysgdgsvprfaryeegikfngtfeiaqltddvekklpf 559  Pyrococcus horikosh...
O29883      --------------------------------------------------------------------------------      Archaeoglobus fulgi...
O26878      --------------------------------------------------------------------------------      Methanothermobacter...
Q58812      --------------------------------------------------------------------------------      Methanocaldococcus ...
O58221  560 feeiawylsffgikakvrvdktgdkykvrlifsqsidnvlnflefipislspakrekflrevesylaavpesslagriee 639  Pyrococcus horikosh...
O29883      --------------------------------------------------------------------------------      Archaeoglobus fulgi...
O26878      --------------------------------------------------------------------------------      Methanothermobacter...
Q58812      --------------------------------------------------------------------------------      Methanocaldococcus ...
O58221  640 lrehfnrikkgerrsfietwevvnvtynvttetgnllanglfvknSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATLSL 719  Pyrococcus horikosh...
O29883  204 ---------------------------------------------SGGLETPAHERVEAGAIHRAHKGVLYIDEINTLTI 238  Archaeoglobus fulgi...
O26878  219 ---------------------------------------------SGGLGTPAHERVEAGMIHKANKGVLYIDEIGTMKM 253  Methanothermobacter...
Q58812  215 ---------------------------------------------RPPLGTPPHKRIILGAIHEAHRGILYVDEIKTMPL 249  Methanocaldococcus ...
O58221  720 KMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLDTIEKMHPALRSRIRGYGYEVYMRTTMPDTPENR 799  Pyrococcus horikosh...
O29883  239 ESQQKLLTALQDKKFPITGQSERSSGAMVRTEPVPCDFILVAAGNLDALMGMHPALRSRIEGYGYEVYMNDTMPDTPENR 318  Archaeoglobus fulgi...
O26878  254 KTQQELLTAMQEKRYSITGQSETSSGAMVRSQAVPCDFVLVASGNLQVLEGMHPALRSRIRGYGYEVFMKDTMPDTPENR 333  Methanothermobacter...
Q58812  250 EVQDYILTALQDKQLPISGRNPNSSGATVETNPIPCDFILIMSGNMDDVYNLRAPLLDRID---YKIVLKNKMDNTLENR 326  Methanocaldococcus ...
O58221  800 RKLVQFVAQEVKKDGRIPHFTRDAVEEIVREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAV------------------- 860  Pyrococcus horikosh...
O29883  319 QKLVRFVAQEVVKDGKIPHFDKYAVAEIIKEARRRAGRRNHLTLRLRELGGLVRTAGDIAK------------------- 379  Archaeoglobus fulgi...
O26878  334 DKLVQFVAQEVEKDGRIPHFSREAVEEIIREAQRRAGKKDSLTLKLRELGGLVRAAGDIAK------------------- 394  Methanothermobacter...
Q58812  327 DKLLQFIVQEIKNN-NLNPMTYDGCCEVVRIAQYLAGSKDKLTLRLRLLANIIKMANDVAMgkdveellgnfddkgeyhp 405  Methanocaldococcus ...
O58221  861 -----RKGKKYVTREDVLEALKLAKP-LEKQLADWYIERKKEYQVIR-VEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPA 933  Pyrococcus horikosh...
O29883  380 -----SEGSDIVRLEHVLKAKKIAKT-IEEQLADKYIERRKDYKLFI-TEGYEVGRVNGLAVIGESAGIVLPIIAEVTPS 452  Archaeoglobus fulgi...
O26878  395 -----SRGAELVETEDVIEAKKLSRT-LEQQIADRYIVQKKKYSVFK-SEGGEVGRVNGLAIIGDRSGIILPIAAEAAPA 467  Methanothermobacter...
Q58812  406 etqkdKSNKVYITAEHVRKVFDTGIYsMEKQVALNYIKNFKRYKHIVpNDEPKVGVIYGLAVLG-AGGIGDVTKIIVQIL 484  Methanocaldococcus ...
O58221  934 ASKEEGKIIVTGKLGEIAKEAVLNVSAIIKRYKGE----------DISKYDIHVQFLQTYEGVEGDSASISVATAVISAL 1003 Pyrococcus horikosh...
O29883  453 MSKSEGRVIATGRLQEIAREAVMNVSAIIKKYTGR----------DISNMDVHIQFVGTYEGVEGDSASISIATAVISAI 522  Archaeoglobus fulgi...
O26878  468 QSKEEGRIIATGKLGEIAREAVQNVSALIKKYTGT----------DISNYDIHIQFLQAYDGVEGDSASVSVATAVISAL 537  Methanothermobacter...
Q58812  485 ESKNPGTHLLN-ISGDIAKHSITLASALSKKLVAEkklplpkkdiDLNNKEIYIQFSQSYSKIDGDSATAAVCLAIISAL 563  Methanocaldococcus ...
O58221 1004 EEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEAGIKTVIIPKSNEKDVFLSPDKRKKIKIIPVERIDEVLEVALVE 1083 Pyrococcus horikosh...
O29883  523 EGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKKVIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVLED 602  Archaeoglobus fulgi...
O26878  538 EEIPVDQSVALTGSLSIRGDVLPVGGVTGKIEAAAEAGIRKVLIPASNMGDVMIEKKYEDMVEIVPVETLGDVLEHALIG 617  Methanothermobacter...
Q58812  564 LDIPLKQDFAITGSLDLSGNVLAIGGVNEKIEAAKRYGFKRVIIPEANMIDVI---ETEG-IEIIPVKTLDEIVPLVFDL 639  Methanocaldococcus ...
O58221 1084 SEKKRELIKRVRE 1096 Pyrococcus horikoshii OT3
O29883  603 GKKKNRLMSKFKE 615  Archaeoglobus fulgidus DSM 4304
O26878  618 -KGKESLIQRMQK 629  Methanothermobacter thermautotrophicus str. Delta H
Q58812  640 DNRGG--AERFN- 649  Methanocaldococcus jannaschii DSM 2661
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