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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 3 3 -
BioSample 2 2 -
GEO DataSets 4 4 -
Gene 2,177 2,177 -
Identical Protein Groups 3,057 3,057 -
Nucleotide 81 81 9
PubChem BioAssay 4 4 -
PMC 55 55 -
Protein 5,612 5,612 -
SRA 1 1 -
Structure 476 476 -
Taxonomy 1 1 -

Pyrococcus horikoshii OT3

Taxonomy ID: 70601 (for references in articles please use ncbitaxon:70601)
current name
Pyrococcus horikoshii OT3
equivalent:
Pyrococcus horikoshii OT-3
Pyrococcus horikoshii str. OT3
NCBI BLAST name: euryarchaeotes
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym Pyrococcus shinkaii OT3
Lineage(full)
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus horikoshii

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Kawarabayasi Y et al. (1998a)
Kawarabayasi, Y., Sawada, M., Horikawa, H., Haikawa, Y., Hino, Y., Yamamoto, S., Sekine, M., Baba, S., Kosugi, H., Hosoyama, A., Nagai, Y., Sakai, M., Ogura, K., Otsuka, R., Nakazawa, H., Takamiya, M., Ohfuku, Y., Funahashi, T., Tanaka, T., Kudoh, Y., Yamazaki, J., Kushida, N., Oguchi, A., Aoki, K., and Kikuchi, H. "Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." DNA Res. (1998) 5:55-76.
Kawarabayasi Y et al. (1998b)
Kawarabayasi, Y., Sawada, M., Horikawa, H., Haikawa, Y., Hino, Y., Yamamoto, S., Sekine, M., Baba, S., Kosugi, H., Hosoyama, A., Nagai, Y., Sakai, M., Ogura, K., Otsuka, R., Nakazawa, H., Takamiya, M., Ohfuku, Y., Funahashi, T., Tanaka, T., Kudoh, Y., Yamazaki, J., Kushida, N., Oguchi, A., Aoki, K., and Kikuchi, H. "Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3 (supplement)." DNA Res. (1998) 5:147-155.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pyrococcus horikoshii type strain (BD-ID 16857) meta-databases BacDive
Pyrococcus horikoshii OT3 organism-specific BioCyc
Pyrococcus horikoshii OT3 organism-specific BioCyc
Pyrococcus horikoshii OT3 organism-specific BioCyc
GOLD: Go0000775 organism-specific Genomes On Line Database
2923400019: Pyrococcus horikoshii OT3 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Pyrococcus horikoshii type strain (SI-ID 44181) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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