Conserved Protein Domain Family
SSV1_ORF_D-335

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pfam07935: SSV1_ORF_D-335 
ORF D-335-like protein
The sequences featured in this family are similar to a probable integrase expressed by the SSV1 virus of the archaebacterium Sulfolobus shibatae. This protein may be necessary for the integration of the virus into the host genome by a process of site-specific recombination.
Statistics
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PSSM-Id: 311750
Aligned: 10 rows
Threshold Bit Score: 75.6013
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q980M8              9 TNGDVIIRERKGKYYVYKLET-INGEVKETYVGPLADVVETYEKLKdsSGGvRV-----SPtTwARwdlNPG--PPPC 78  Saccharolobu...
Q980K4             18 KYGDIIIRERKGRYYVYKLEY-ENGNVKETYVDPLVDVVETYEKLKd-SSG-GFrgyppNP-T-TD---PPG--FEPG 85  Saccharolobu...
Q97ZP9              8 KYGD-IIRERKGRYYVYKLET-INGEVKETYVGPLVDVVKTYEKLKe--NGvWV-----SP-T-MG---PLG--FEPR 69  Saccharolobu...
Q975S9              9 KFGDYILRERKGRYYVYKLET-INGEVKERYVAPLIDVVETYIK----IMGaGV-----VPpQwARwdlNPG--PPPr 74  Sulfurisphae...
Q975L1              9 KFGEYILRERKGRYYVYKLET-INGEVKERYVAPLIDVVETYIKLKe-SGSvGV-----SP-T-VR---PPG--FEPG 72  Sulfurisphae...
Q97ZN2             18 KYGDIIIRERKGRYYVYKLEM-INGKVRETYVGPLIDVVESFIKLKe-IGGvGI-----SP-T-TD---PPG--FEPG 81  Saccharolobu...
P20214              9 KYGDYILRERKGRYYVYKLEY-ENGEVKERYVGPLADVVESYLKMK--LGVvGD-----TPlQ-AD---PPG--FEPG 72  Sulfolobus s...
RogerUC:Ahos_2140   7 TFGDIRIREVKGKYYVYLIEKgDGGQRRDHYIGSLDKIIETYVS----IGGvGV-----PP-T-VR---GAG--FEPA 68 
Q975X2             16 SAGQYKIRQRGNKYYVYKIEKdSNGNVKETYVGPLDKIVEFYVS----IGGvGV-----SP-T-VD---RPG--FEPG 77  Sulfurisphae...
BAK54423            7 SAGQYKIRQRGKKYYVYKIEKdSNGNVKETYIGPLDKIVE--IA----LGVlGG-----VP-L-TQ---WTGrdLNPG 68 
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