Conserved Protein Domain Family
SpoVAC_SpoVAEB

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pfam03862: SpoVAC_SpoVAEB 
SpoVAC/SpoVAEB sporulation membrane protein
Members of this family are all transcribed from the spoVA operon. Bacillus and Clostridium are two well studied endospore forming bacteria. Spore formation provides a resistance mechanism in response to extreme or unfavourable environmental conditions such as heat, radiation, and chemical agents or nutrient deprivation. The reverse process termed germination takes place where spores develop into growing cells in response to nutrient availability or stress reduction. Nutrient germinant receptors (GRs) and the SpoVA proteins are important players in the germination process. In B.subtilis the SpoVAC and SpoVAEB, belonging to this domain family, are predicted to be membrane proteins, with two to five membrane spanning. Biophysical and biochemical studies suggest that SpoVAC acts as a mechano-sensitive channel with properties that would allow the release of Ca-DPA (dipicolinic acid) and amino acids during germination of the spore. The release of Ca-DPA is a crucial event during spore germination. When expressed in E.coli SpoVAC provides protection against osmotic downshift. Furthermore, SpoVAC acts as channel that facilitates the efflux down the concentration gradient of osmolytes up to a mass of at least 600 Da. Another conserved SpoVA protein in all spore-forming bacteria is SpoVAEb, which appears to be an integral membrane protein with no known function.
Statistics
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PSSM-Id: 427551
Aligned: 328 rows
Threshold Bit Score: 88.1858
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_021984966  26 NCLHAFLVGGCICLLGQVIFNVCttQfhyeeadAMSVCSILLVFLSVLLTGLNLYKPLAKYGGAGALVPITGFANSVAAP 105 Eubacteriales
CDD09012       6 TYLKVFAVGGFVCMLGQVLINTT--Km------TSARILVTFLMLGVVLEVTGAFDYIEEFAHAGITVPITGFGSNLAKG 77 
WP_007286325   4 NYLKVFLVGGTICLIAQILMDYF--Kl------QTPYVMVTYVTTGVILTFLGIYDKIVDFGAAGATVPIIGFGYSLGNG 75  Intestinibacter...
Q189X0         4 DYVRVFIVGGIICLIAQVMMDYF--Km------QTPYVMVTYVTTGVVLTFLGLYEPLVKFAAAGATVPIIGFGYSLATG 75  Clostridioides ...
WP_006568837   2 EYVKAFIVGGIICILVQILMDNT--Kl------QPGRIMVILVVSGAVLGALGIYEKIADFAGCGATVPLSGFGFTLWKG 73  Anaerostipes ca...
WP_117983769   2 iYLKAFVVGGLICTLVQIFLDNT--Kl------MPGRVMVLLVIAGVILGAAGLYEPLIKWAGCGASVPLSGFGYNLSKG 73  Anaerobutyricum...
WP_021939219   2 EYLKAFIIGGVICMLVQILMDHT--Kl------MPGRIMVLLVCSGVVLGAVGVYEPFLKFAECGASVPLSGFGYNLWKG 73  Coprococcus sp....
CCY58582       2 NYVWAFLIGGGICVLAQILMDTT--Km------MPGRVMVTLVCGGAILGALGLYEPLLKFAGGGAAVPLSGFGYNLWKG 73 
CCX89645       2 AYIKAFVIGGLICAMAQILMEKT--Kl------MPGRIMVILVCTGAILGALQIYEPFLDFAGSGASVPLTGFGYNLWKG 73 
WP_021984968   2 DYILAFVIGGIICVLSQILMDTT--Kl------MPGRVMVILVCTGVILGAVGIYEPFMKFAGAGAFVPLTGFGYNLWKG 73  Eubacteriales
WP_021984966 106 TIEYKKEGEVFGKGVKVFTIAGPVILFGVVVSFVAGFI 143 Eubacteriales
CDD09012      78 AIKGVKEEGILGAVKGGMSAVSSGLSAAIFFGFIFALI 115
WP_007286325  76 VIEGIKKDGFLGILTGGTIATAGGIAAAIFFGYVMAVI 113 Intestinibacter bartlettii
Q189X0        76 VIKSIQSDGFLGIFLGGTTATAGGIAAAIFFGYIMSVV 113 Clostridioides difficile 630
WP_006568837  74 MKEAIDQHGFLGLFEGGFTAAAVGTSAALIFSYLASLI 111 Anaerostipes caccae
WP_117983769  74 VIEAVKEEGAIGLFKGGLKAAAAGTSSALIFSYIASLI 111 Anaerobutyricum hallii
WP_021939219  74 VKEAVDSDGFIGLFRGGFKMAAVGTSAALIFSYIISLI 111 Coprococcus sp. OM04-5BH
CCY58582      74 IKEAVDQDGFIGLFRGGFRMAAVGTSSALVFSYLASLI 111
CCX89645      74 IKEAVDQDGFIGLFRGGFKMAAVGTSAALIYAYIASLI 111
WP_021984968  74 IKDAVNEDGFLGLFRGGFKMAAVGTSAALIFSYFASLI 111 Eubacteriales
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