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Report for CCDS9445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9445.1 Public Homo sapiens 13 KLHL1 24 110 108 CCDS HistoryNCBI Gene:57626Re-query CCDS DB by CCDS ID:9445.1Re-query CCDS DB by GeneID:57626See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377844.9 ENSP00000367075.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377844.9Link to Ensembl Protein Viewer:ENSP00000367075.4Re-query CCDS DB by Nucleotide ID:ENST00000377844Re-query CCDS DB by Protein ID:ENSP00000367075
Original member Current member NCBI NM_020866.3 NP_065917.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020866.3Link to Protein Sequence:NP_065917.1Re-query CCDS DB by Nucleotide ID:NM_020866Re-query CCDS DB by Protein ID:NP_065917Link to BLAST:NP_065917.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065917.1 748 Q9NR64 748 100% 0 0

Chromosomal Locations for CCDS 9445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 69701702 69701761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69707625 69707796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69719369 69719581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69740394 69740556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69796738 69796962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69838976 69839162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69882283 69882495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69940040 69940236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69961308 69961444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69975620 69975802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 70107203 70107699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2247 nt):
ATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATTCTGCGACTCCGCTGGAAACTCTTCAGCC
ACCCGTCTCCTTCCACCGGCGGCCCGGCGGGGGGAGGCTGCCTGCAACAGGACGGCAGTGGCAGCTTTGA
GCACTGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTGAGCACTTTCTGGAAG
AAGCCTTCCTCCTCTTCCTCTTCATCGTCCTCCCCGTCCTCTTCCTCCTCTTCCTTCAATCCGCTGAATG
GCACCCTGCTTCCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGGGCAGGGCACTCAGCAGCCAGCCAG
GACTCTCTTCTACGTGGAGTCACTAGAGGAGGAGGTGGTGCCAGGCATGGACTTTCCTGGACCACACGAA
AAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTG
GACACAGGCTGTCATCAACCGGCCATTCAATGACACCTCAAAGTGATTTGGACTCCAGTAGCTCTGAAGA
ATTCTATCAAGCTGTTCATCATGCTGAGCAAACCTTCAGAAAGATGGAAAGTTATTTGAAGCAGCAGCAA
CTTTGTGATGTTATCCTGATTGTTGGGAACCGAAAGATACCTGCACATAGGCTTGTTCTGAGTTCAGTCT
CCGACTATTTTGCGGCCATGTTTACAAGTGATGTTTGTGAAGCCAAGCAAGAGGAGATCAAAATGGAAGG
CATAGACCCCAATGCTCTCTGGGACCTTGTCCAATTTGCATATACAGGCTGCTTGGAATTAAAAGAGGAC
ACCATTGAGAACCTTCTTGCTGCAGCGTGCCTTCTTCAGCTTCCACAGGTGGTGGAAGTGTGCTGCCACT
TCCTCATGAAGCTTTTGCATCCATCTAACTGTTTAGGAATTCGAGCCTTCGCAGATGCTCAAGGATGCAT
TGAGTTAATGAAGGTGGCCCACAGCTACACAATGGAAAACATAATGGAAGTTATCAGAAATCAAGAGTTT
TTACTCCTTCCAGCTGAGGAGCTCCATAAACTACTGGCCAGTGATGATGTCAATGTTCCTGATGAAGAAA
CCATCTTCCATGCATTGATGATGTGGGTCAAGTATGACATGCAGAGTAGATGCAATGACCTGAGCATGCT
TCTTGCCTTTATAAGACTGCCACTGCTTCCACCACAGATATTGGCTGACCTAGAAAATCATGCATTATTT
AAGAATGATCTGGAATGTCAAAAGCTGATTCTAGAAGCAATGAAATACCATCTATTGCCAGAAAGAAGAA
CTTTAATGCAAAGTCCGAGAACTAAACCCAGAAAATCTACAGTCGGAACTTTGTATGCTGTAGGAGGAAT
GGATAACAACAAAGGAGCTACAACTATAGAGAAATATGATCTGAGAACAAATCTGTGGATCCAGGCAGGG
ATGATGAATGGCAGAAGGCTGCAGTTTGGTGTGGCTGTTATTGATGACAAACTCTTTGTAATTGGAGGTC
GAGATGGCTTAAAGACATTGAACACTGTTGAATGTTACAATCCCAAAACCAAGACATGGACTGTCTTACC
ACCAATGTCAACACACAGACATGGTCTAGGTGTAACAGTACTTGAAGGCCCTATTTATGCTGTGGGAGGC
CATGATGGCTGGAGCTATCTGAATACAGTGGAAAGGTGGGATCCACAGAGTCAACAATGGACATTTGTAG
CCAGTATGTCAATTGCTCGGAGCACAGTTGGTGTAGCAGCATTGAATGGCAAGTTGTATTCAGTTGGAGG
TCGTGATGGAAGTTCCTGTTTGAGTTCAATGGAATATTATGATCCTCATACAAATAAGTGGAACATGTGT
GCTCCCATGTGTAAGAGGAGAGGGGGTGTCGGAGTGGCCACATGTGACGGTTTTCTTTATGCAGTAGGAG
GTCATGATGCTCCTGCTTCAAATCACTGTTCCCGGCTACTGGATTATGTAGAAAGATATGATCCCAAAAC
AGACACTTGGACCATGGTGGCTCCTTTGAGTATGCCCAGAGATGCTGTTGGGGTCTGTCTCCTTGGTGAC
AGATTATATGCTGTTGGTGGCTATGATGGACAGACATACCTCAACACTATGGAATCCTATGACCCACAAA
CTAATGAGTGGACACAGATGGCTTCCTTGAATATTGGGAGAGCAGGTGCCTGTGTGGTAGTCATCAAGCA
ACCTTGA

Translation (748 aa):
MSGSGRKDFDVKHILRLRWKLFSHPSPSTGGPAGGGCLQQDGSGSFEHWGPSQSRLLKSQERSGVSTFWK
KPSSSSSSSSSPSSSSSSFNPLNGTLLPVATRLQQGAPGQGTQQPARTLFYVESLEEEVVPGMDFPGPHE
KGLVLQELKVEPDNSSQATGEGCGHRLSSTGHSMTPQSDLDSSSSEEFYQAVHHAEQTFRKMESYLKQQQ
LCDVILIVGNRKIPAHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAYTGCLELKED
TIENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIRAFADAQGCIELMKVAHSYTMENIMEVIRNQEF
LLLPAEELHKLLASDDVNVPDEETIFHALMMWVKYDMQSRCNDLSMLLAFIRLPLLPPQILADLENHALF
KNDLECQKLILEAMKYHLLPERRTLMQSPRTKPRKSTVGTLYAVGGMDNNKGATTIEKYDLRTNLWIQAG
MMNGRRLQFGVAVIDDKLFVIGGRDGLKTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVLEGPIYAVGG
HDGWSYLNTVERWDPQSQQWTFVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWNMC
APMCKRRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVGVCLLGD
RLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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