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Report for CCDS30219.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
30219.2 |
Public |
Mus musculus |
X |
Irak1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 30219.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000068286.11 |
ENSMUSP00000064448.5 |
Accepted |
alive |
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EBI |
ENSMUST00000114352.7 |
ENSMUSP00000109992.1 |
Accepted |
alive |
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NCBI |
NM_001177974.1 |
NP_001171445.1 |
Accepted |
alive |
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NCBI |
NM_008363.2 |
NP_032389.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 30219.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2133 nt): ATGGCCGGGGGGCCGGGCCCCGGGGAGCCTGTGGTTCCAGGCGCCCAGCACTTCTTGTACGAGGTGCCAC CCTGGGTTATGTGCCGCTTCTACAAAGTGATGGACGCCCTGGAGCCCGCCGACTGGTGCCAGTTCGCGGC CTTGATCGTGCGCGACCAGACAGAGCTGCGGCTGTGCGAGCGCTCCGAGCAGCGCACAGCCAGTGTTCTG TGGCCCTGGATCAACCGCAACGCGCGCGTAGCTGACCTCGTTCACATCCTCACGCACCTGCAGCTGCTGC GTGCGAGGGACATCATCACAGCCTGGCACCCTCCTGCCCCCGTTGTGCCCCCAAGCACCGCTGCCCCAAG GCCCAGCAGCATCTCTGCAGGCTCTGAGGCCGGGGACTGGAGCCCCCGGAAATTGCAGTCCTCTGCCTCC ACCTTCCTCTCCCCAGCTTTTCCAGGCTCCCAGACCCATTCTGAGTCAGAGCTCCTCCAGGTTCCACTCC CTGTTTCCCTCGGGCCACCACTACCATCTTCAGCCCCTTCCTCCACCAAGTCAAGCCCAGAGAGCCCAGT GTCTGGCCTCCAAAGAGCCCATCCCTCCCCGTTTTGCTGGCCCTTCTGTGAGATTTCCCAAGGCACCTGC AACTTCTCTGAAGAACTCAGGATTGGAGAGGGTGGTTTTGGATGTGTGTACCGAGCAGTCATGAGAAATA CTACATATGCTGTGAAGAGACTGAAGGAGGAAGCTGACCTAGAGTGGACTATGGTGAAACAGAGCTTCTT AACAGAGGTGGAACAGCTATCAAGGTTTCGTCACCCAAATATCGTAGACTTTGCTGGCTACTGTGCAGAG AGTGGCTTATACTGCCTTGTTTATGGCTTCTTGCCCAATGGCTCCTTGGAGGATCAGCTCCACCTTCAGA CCCAGGCCTGCTCCCCACTTTCCTGGCCTCAACGACTGGACATTCTTCTGGGCACAGCCCGGGCTATTCA GTTTTTACATCAGGATAGCCCCAGCCTTATCCATGGAGACATCAAGAGTTCTAACGTGCTTCTGGATGAG AGACTGATGCCCAAGCTGGGAGACTTTGGCCTGGCTCGTTTCAGCCGCTTTGCGGGGGCCAAAGCAAGCC AGAGCAGTACTGTGGCCCGGACTTCCACAGTTCGAGGTACCCTCGCCTACTTGCCTGAGGAGTACATCAA GACAGGCCGACTGGCTGTGGACACCGATACCTTCAGCTTTGGGGTGGTAATACTGGAGACCCTTGCTGGT CAGAGGGCTGTGAGGACACAAGGTGCAAAGACCAAGTATTTGAAAGACCTGATTGAAGATGAGGCTGAAG AGGCTGGAGTGACCCTGAAAAGCACCCAGCCTACTCTGTGGGTGGGTGTAGCCACGGATGCTTGGGCTGC TCCAATTGCTGCCCAGATCTATAAGAAGCACCTGGACTCCAGACCTGGGCCCTGCCCACCCCAGTTGGGC CTGGCCCTGGCTCAACTAGCTTGCTGCTGCATGCACCGTCGGGCCAAGAAGAGGCCCCCCATGACCCAGG TATACAAGAGACTAGAAGGGCTTCAGGCAGGGCCTCCCTGGGAGCTAGAGGTTGCCGGCCATGGCTCCCC TTCCCCACAGGAGAACTCCTACATGTCTACCACTGGCAGTGCCCAGAGTGGGGATGAACCATGGCAGCCT CTAGTAGTGACCACAAGAGCCCCAGCCCAGGCTGCCCAGCAACTCCAGAGAAGTCCCAACCAGCCAGTGG AAAGTGATGAGAGTGTTCCCGGCCTCTCTGCTACCCTGCATTCCTGGCACTTGACTCCAGGTTCCCACCC AAGCCCAGCGTCCTTCAGAGAGGCTAGCTGTACCCAGGGAGGCACTACCAGAGAATCAAGTGTGAGGAGT AGCCCAGGCTTCCAGCCTACAACCATGGAAGGCTCACCCACGGGCAGCTCATCCCTGCTGTCATCAGAAC CACCACAGATCATCATCAACCCAGCCCGACAGAAGATGGTACAAAAGCTGGCTCTTTATGAAGAAGGGGT CTTGGATAGCCTGCAACTGCTGTCATCAGGCTTTTTCCCAGGCTTGGATTTAGAACCTGAAAAGAGCCAG GGACCTGAAGAAAGTGATGAATTCCAGAGCTGA
Translation (710 aa): MAGGPGPGEPVVPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSEQRTASVL WPWINRNARVADLVHILTHLQLLRARDIITAWHPPAPVVPPSTAAPRPSSISAGSEAGDWSPRKLQSSAS TFLSPAFPGSQTHSESELLQVPLPVSLGPPLPSSAPSSTKSSPESPVSGLQRAHPSPFCWPFCEISQGTC NFSEELRIGEGGFGCVYRAVMRNTTYAVKRLKEEADLEWTMVKQSFLTEVEQLSRFRHPNIVDFAGYCAE SGLYCLVYGFLPNGSLEDQLHLQTQACSPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDE RLMPKLGDFGLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETLAG QRAVRTQGAKTKYLKDLIEDEAEEAGVTLKSTQPTLWVGVATDAWAAPIAAQIYKKHLDSRPGPCPPQLG LALAQLACCCMHRRAKKRPPMTQVYKRLEGLQAGPPWELEVAGHGSPSPQENSYMSTTGSAQSGDEPWQP LVVTTRAPAQAAQQLQRSPNQPVESDESVPGLSATLHSWHLTPGSHPSPASFREASCTQGGTTRESSVRS SPGFQPTTMEGSPTGSSSLLSSEPPQIIINPARQKMVQKLALYEEGVLDSLQLLSSGFFPGLDLEPEKSQ GPEESDEFQS
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