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Report for CCDS93292.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93292.1 Public Homo sapiens 3 TASOR 24 110 108 CCDS HistoryNCBI Gene:23272Re-query CCDS DB by CCDS ID:93292.1Re-query CCDS DB by GeneID:23272See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93292.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000683822.1 ENSP00000508241.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683822.1Link to Ensembl Protein Viewer:ENSP00000508241.1Re-query CCDS DB by Nucleotide ID:ENST00000683822Re-query CCDS DB by Protein ID:ENSP00000508241
Original member Current member NCBI NM_001365635.2 NP_001352564.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365635.2Link to Protein Sequence:NP_001352564.1Re-query CCDS DB by Nucleotide ID:NM_001365635Re-query CCDS DB by Protein ID:NP_001352564Link to BLAST:NP_001352564.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352564.1 1670 Q9UK61-1 1670 100% 0 0

Chromosomal Locations for CCDS 93292.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 56623037 56623566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56624479 56624643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56624828 56625006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56627037 56627145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56627582 56627741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56628492 56628614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56633044 56633966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56638706 56638765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56639986 56640130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56641349 56641752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56646522 56647223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56648822 56648893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56648985 56649057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56660731 56660834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56660914 56661017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56662385 56662490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56663541 56663572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56666260 56666384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56668397 56668558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56669700 56669791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56670073 56670145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56671600 56671692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56673580 56673725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 56682676 56683006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5013 nt):
ATGGCGACTGCTGTGGAGACGGAGGCCTGTCAGCCGACGGATGCGAGTTGGGAAAGTGGCGGCGGCGGAG
ACGACGAGATGAAGCAGGCGCTTCCGGAGCTTGAGTCCTCCCAACAAAATGGCGGCGGCGGCGGCCTCAA
CATCGCTGAGCCCAGCGGCGGCGCTGGGCGTGAGGAGAACGCGGGGGCCGAGGCCGCCCAGAGCCTCAGC
CACGAGCAGCCTCAGGACTCCTCTGAGGCGGGCGCGGCCGCCCTGCCCAGAGGCCCCGAAGAGCCCGAAA
GGCCTGTTAGGAGGAGTTTTCAGATCCCCAGGAAGAGCAGAGAAAAGAAAGCACTTTTCCAGCCATTAAC
TCCAGGCTCTCGAGAATTTGAAGATGTTGTAAATATTCTCCATTCTTCTTACCTTGAACCAACCTCAGTA
ACAAATTTTAACTACAGACGTGCTTGCTTGGTACACAATGAGCTTTTGGAAAAGGAGTTTACAGAAAAGC
GAAGAGAACTGAAGTTTGATGGTCGTTTAGATAAGGAACTTTCAGAATCCTATGCATTTCTGATGGTTGA
TCGATACCAGGTTCAAACCATATGTGAAAAAGGATTACATGTGGGTCAGTCCAAAATAACAATTCTTGGC
AGTCCTTCCATGGGTGTCTATCTTTCTAGGTATGCTGATTTATTACAAGCGAATCCTTTGGACACGGGGG
CAATGGGTGATGTTGTTATTTTTAAAATAATGAAGGGTAAAATAAAGAGTATATATGACCCCATGGGTGT
AAAAAGTTTGGAATCTATGTTAAATAAGAGTGCTTTGGACCCCACACCAAAGCATGAATGTCACGTGTCA
AAGAATGCCAATCGAATTACATCACTTTTGGCTTACAGAGCCTATGAGCTTACTCAGTATTATTTTTATG
AGTATGGCTTTGATGAGCTAAGGCGAAGACCAAGACACGTTTGTCCATATGCAGTTGTGTCTTTTACTTA
CAAAGATGATATACAAACTCCGAAGTTTGTACCTTCATCAAGATCTAACAGCTTTAATACAGATAGAAAC
ATAGATAAATATAACTATACCTTGTGGAAAGGACAGCTTTTAAATAAAGGAAAACTTTTGTGTTATATTT
CTCTGAGGTCAGCCACTCGTGCTTTTTTGCCTATCAAACTACCTGAGAAATTAGATGTTGAAACAGTTAT
GAGTATTGATCATCTGAAACAGAAAATCCCTCCAGCACTGTTTTATAAGGAAACATACTTAGGTCCAAAT
GAAGTTTTGAAGAATGGAATGTATTGCAGCCTTTATGAAGTTGTGGAAAAGACAAGAATTGGAAGTAACA
TGGAGAGTTTACTGCAAAAACTAGACAGAGAAAAACTTGTTCTTGTTAAACCTTTGGGAGACCGAGGATA
CCTTTTTCTTCTCTCCCCTTATCAGATGGTTCCTCCATATGAATATCAGACTGCCAAGTCTCGAGTCCTA
CATGCTTTGTTTCTATTTCAAGAACCTAGAAGCATAGTTACTTCACAAAAAGGTTCAACCAATGCAGCAC
CACAGGAGAGGCATGAGAGCATGCCAGATGTATTAAAAATAGCTCAGTTTTTACAATTTTCTTTGATTCA
GTGTCGAAAGGAATTCAAAAATATAAGCGCCATAAATTTTCATTCTGTTGTTGAAAAGTATGTAAGTGAA
TTTTTTAAGCGAGGTTTTGGTTCAGGTAAACGAGAGTTTATTATGTTTCCATATGATTCACGATTAGATG
ATAAAAAATTCTTATACTCAGCTCCCAGAAATAAATCCCATATTGATACTTGTTTGCATGCCTATATTTT
TCGGCCTGAAGTGTATCAGTTACCTATTTGTAAATTAAAAGAACTATTTGAAGAAAATAGAAAACTTCAG
CAGTTTAGTCCACTTTCAGATTATGAAGGTCAAGAAGAAGAAATGAATGGTACAAAAATGAAATTTGGAA
AACGAAATAACTCAAGAGGTGAAGCCATTATATCTGGAAAGCAAAGATCATCTCATTCTTTGGATTATGA
TAAGGATAGAGTCAAAGAATTGATTAATTTAATTCAGTGTAGGAAAAAGAGTGTGGGTGGGGACTCAGAC
ACAGAAGATATGAGAAGCAAAACTGTCTTGAAGAGGAAGCTTGAGGATCTACCTGAAAATATGAGAAAGC
TCGCCAAAACCAGTAATTTATCTGAAAATTGCCATCTGTATGAAGAGTCTCCACAGCCTATTGGCTCACT
TGGACATGATGCTGACTTGAGGCGGCAGCAGCAGGATACCTGTAACTCCGGCATTGCTGACATCCATAGG
CTGTTTAATTGGTTATCAGAAACACTAGCAAATGCGCGCCATTCTGATGCATCTCTGACAGACACAGTCA
ACAAAGCCTTAGGATTGAGCACTGATGATGCCTATGAAGAGCTGAGGCAAAAACATGAGTATGAGTTGAA
CTCTACCCCAGATAAGAAAGACTATGAGCAGCCTACTTGTGCAAAAGTTGAAAATGCACAGTTTAAGGGT
ACTCAGAGCTTATTACTAGAAGTTGATGCAACATCTAAGTATTCTGTTGCTATTTCTACCAGCGAAGTGG
GCACTGACCATAAGCTACATTTGAAAGAAGATCCAAATTTAATTAGCGTGAATAATTTTGAAGATTGCAG
TTTGTGTCCCAGTGTTCCCATTGAACATGGATTTCGTAGACAACAGTCTAAGTCAAATAATGTTGAAGAG
ACTGAAATACATTGGAAACTGATTCCAATTACAGGAGGGAATGCAAGAAGCCCAGAAGACCAGCTGGGGA
AACATGGTGAGAAACAAACACCAGGTATGAAATCACCAGAAGAACAACTGGTGTGTGTGCCACCACAGGA
GGCCTTTCCTAACGACCCCCGGGTAATAAATAGACAGAGAAGTTCTGATTACCAGTTTCCATCCTCTCCA
TTTACAGACACACTAAAGGGCACCACTGAGGATGACGTGTTGACAGGTCAGGTGGAGGAGCAGTGTGTGC
CAGCAGCAGAGGCAGAGCCGCCTGCAGTGAGCGAAACCACAGAGAGGACAGTGTTAGGAGAGTACAATCT
CTTTTCTAGGAAGATAGAAGAGATTTTGAAGCAAAAGAATGTTTCATATGTCAGTACAGTTTCCACACCT
ATCTTTTCAACACAAGAGAAGATGAAACGGCTTTCCGAGTTCATATATTCTAAGACTTCCAAAGCTGGTG
TGCAGGAGTTTGTAGATGGTTTGCATGAGAAGCTAAATACTATTATTATTAAAGCATCAGCCAAGGGTGG
GAATTTGCCACCAGTCAGTCCTAACGATTCTGGTGCTAAGATAGCATCGAATCCTCTGGAAAGGCATGTC
ATACCAGTTTCCTCAAGTGACTTCAACAATAAACATCTCCTTGAGCCACTGTGTAGTGATCCTTTGAAAG
ATACCAACTCTGATGAGCAGCATTCCACTTCGGCTTTAACTGAAGTAGAAATGAACCAGCCTCAACATGC
CACAGAGTTAATGGTGACTTCTGATCATATTGTACCTGGTGATATGGCCCGGGAACCAGTAGAAGAAACA
ACAAAATCCCCCAGTGATGTAAACATTTCTGCTCAACCAGCTCTTTCAAATTTTATAAGCCAGTTAGAAC
CTGAAGTATTTAATAGTTTGGTTAAAATCATGAAAGACGTCCAGAAAAATACTGTGAAATTTTATATTCA
TGAAGAAGAAGAGAGTGTGCTCTGTAAAGAAATAAAGGAATATCTTATCAAATTAGGCAATACAGAATGT
CATCCTGAACAGTTTTTGGAAAGAAGATCAAAATTAGATAAACTATTGATTATTATTCAAAATGAAGACA
TTGCAGGTTTCATTCACAAGATACCTGGCTTGGTGACTTTAAAGAAGCTCCCCTGTGTTAGTTTTGCTGG
TGTTGATAGCCTGGATGATGTTAAAAATCATACATACAATGAATTATTTGTATCTGGAGGTTTTATCGTA
TCTGATGAATCAATTCTAAACCCAGAGGTTGTCACAGTTGAGAACCTTAAAAATTTTTTGACATTCCTTG
AGGAACTTAGTACTCCAGAAGGAAAATGGCAATGGAAAGTCCACTGTAAATTTCAGAAGAAACTAAAGGA
ACTAGGCAGATTGAATGCTAAAGCTCTAAGTCTGTTGACGCTTCTGAATGTCTATCAGAAGAAACATCTG
GTTGAAATTTTGTCATACCACAATTGTGATTCACAAACTCGAAATGCTCCAGAATTGGATTGCCTTATCA
GACTTCAGGCTCAGAACATACAGCAACGACACATAGTCTTTTTAACAGAGAAGAACATCAAGATGCTTTC
CAGTTATACAGATAATGGAATAGTGGTTGCAACTGCTGAAGACTTCATGCAAAACTTTAAAAATCTTGTG
GGCTATCACAATTCAATCACAGAAGAAAACCTTCCACAGCTTGGTGCTAATGAGAATCTTGAGTCGCAGT
CAGCTCTTTTAGAAAACGATGAAAAGGATGAAGAGGATATGTCTCTGGATTCAGGGGATGAAATCTCACA
TATAGAAGTATGCAGCAATTTTCATTCAGAAATATGGGAGAAAGAGACCAAAGGATCACGTGGAACAGAT
CAAAAAAAGAATACTCAAATTGAGTTGCAATCGTCTCCTGATGTGCAAAACAGTTTATTAGAAGATAAGA
CTTACCTTGATTCTGAAGAGAGAACTTCTATTGATATAGTATGCTCTGAAGGAGAGAACAGCAATTCAAC
AGAACAAGATTCATATAGTAACTTTCAGGTTTATCATAGTCAATTAAATATGTCCCATCAGTTTAGTCAT
TTTAATGTTCTCACTCATCAGACATTTTTGGGGACACCATATGCCCTTTCATCAAGTCAGTCTCAAGAAA
ATGAGAATTACTTCTTATCTGCTTATACTGAAAGCTTGGATAGAGATAAATCTCCACCTCCCTTAAGTTG
GGGGAAAAGTGATTCTTCCAGGCCATATTCACAAGAGAAATAA

Translation (1670 aa):
MATAVETEACQPTDASWESGGGGDDEMKQALPELESSQQNGGGGGLNIAEPSGGAGREENAGAEAAQSLS
HEQPQDSSEAGAAALPRGPEEPERPVRRSFQIPRKSREKKALFQPLTPGSREFEDVVNILHSSYLEPTSV
TNFNYRRACLVHNELLEKEFTEKRRELKFDGRLDKELSESYAFLMVDRYQVQTICEKGLHVGQSKITILG
SPSMGVYLSRYADLLQANPLDTGAMGDVVIFKIMKGKIKSIYDPMGVKSLESMLNKSALDPTPKHECHVS
KNANRITSLLAYRAYELTQYYFYEYGFDELRRRPRHVCPYAVVSFTYKDDIQTPKFVPSSRSNSFNTDRN
IDKYNYTLWKGQLLNKGKLLCYISLRSATRAFLPIKLPEKLDVETVMSIDHLKQKIPPALFYKETYLGPN
EVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKLVLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVL
HALFLFQEPRSIVTSQKGSTNAAPQERHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSE
FFKRGFGSGKREFIMFPYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQ
QFSPLSDYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVGGDSD
TEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQQQDTCNSGIADIHR
LFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKDYEQPTCAKVENAQFKG
TQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEE
TEIHWKLIPITGGNARSPEDQLGKHGEKQTPGMKSPEEQLVCVPPQEAFPNDPRVINRQRSSDYQFPSSP
FTDTLKGTTEDDVLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTP
IFSTQEKMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPLERHV
IPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDHIVPGDMAREPVEET
TKSPSDVNISAQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTEC
HPEQFLERRSKLDKLLIIIQNEDIAGFIHKIPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIV
SDESILNPEVVTVENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHL
VEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLV
GYHNSITEENLPQLGANENLESQSALLENDEKDEEDMSLDSGDEISHIEVCSNFHSEIWEKETKGSRGTD
QKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIVCSEGENSNSTEQDSYSNFQVYHSQLNMSHQFSH
FNVLTHQTFLGTPYALSSSQSQENENYFLSAYTESLDRDKSPPPLSWGKSDSSRPYSQEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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