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Report for CCDS79358.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79358.1 Public Mus musculus 15 Osmr 23 108 98 CCDS HistoryNCBI Gene:18414Re-query CCDS DB by CCDS ID:79358.1Re-query CCDS DB by GeneID:18414See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79358.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000176826.1 ENSMUSP00000135204.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176826.1Link to Ensembl Protein Viewer:ENSMUSP00000135204.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176826Re-query CCDS DB by Protein ID:ENSMUSP00000135204
Original member NCBI NM_001310469.1 NP_001297398.1 Updated not alive Link to Nucleotide Sequence:NM_001310469.1Link to Protein Sequence:NP_001297398.1Re-query CCDS DB by Nucleotide ID:NM_001310469Re-query CCDS DB by Protein ID:NP_001297398
Current member NCBI NM_001310469.2 NP_001297398.1 Accepted alive Link to Nucleotide Sequence:NM_001310469.2Link to Protein Sequence:NP_001297398.1Re-query CCDS DB by Nucleotide ID:NM_001310469Re-query CCDS DB by Protein ID:NP_001297398Link to BLAST:NP_001297398.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297398.1 970 O70458-2 970 99.8969% 0 1

Chromosomal Locations for CCDS 79358.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 6815371 6815928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6816582 6816654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6816907 6816988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6820921 6821088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6822014 6822187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6823552 6823656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6824473 6824649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6827089 6827311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6828633 6828709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6836916 6837069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6837692 6837831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6841953 6842104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6842782 6842917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6844221 6844499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6847027 6847198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6852419 6852588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6860293 6860365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2913 nt):
ATGGCTTTCTCTGTGGTCCTTCATCCAGCCTTCCTCCTGGCAGTGCTGTCCCTGAGGGCATCCCGAAGCG
AAGTCTTGGAGGAGCCTTTACCATTGACTCCTGAGATACATAAAGTTTCTTTTCAATTGAAACTTCAAGA
AGTGAATTTAGAATGGACTGTCCCAGCCCTTACTCATGAAGAATTAAACATGATATTTCAGATAGAGATC
AGTAGACTGAACATATCCAACACCATCTGGGTGGAGAATTATAGCACCACTGTGAAGCGTGAAGAAGCTG
TGCGTTGGAACTGGACGTCTGATATCCCTTTGGAGTGTGTCAAACATTTCATAAGAATCAGGGCTCTGGT
AGATGACACCAAGTCCCTTCCACAGAGTTCCTGGGGCAACTGGAGTTCCTGGAAAGAAGTTAATGCAAAG
GTTTCCGTTGAACCTGATAAATCATTAATATTTCCTAAAGACAAAGTGTTGGAAGAAGGCTCCAATGTCA
CCATCTGTCTGATGTATGGGCAGAATGTATATAATGTATCCTGTAAGTTGCAAGATGAGCCAATCCATGG
AGAACAACTTGATTCCCACGTGTCATTATTAAAATTGAACAATGTAGTTTTCCTTAGTGACACAGGGACA
AACATCAATTGTCAAGCCACGAAGGGTCCTAAAAGAATATTTGGTACTGTTCTCTTTGTCTCGAAAGTGC
TCGAGGAACCTAAGAATGTTTCCTGTGAAACCCGAGACTTTAAGACTTTGGACTGTTCATGGGAACCTGG
GGTAGATACGACTTTGACTTGGCGTAAACAAAGATTCCAAAACTACACTTTATGTGAATCGTTCTCTAAG
AGATGTGAGGTTTCTAACTACAGGAACTCCTATACCTGGCAAATCACTGAAGGCTCACAGGAAATGTATA
ACTTTACTCTCACAGCTGAAAACCAACTAAGGAAAAGAAGTGTCAACATTAATTTTAACCTGACCCATAG
AGTTCATCCAAAGGCTCCGCAGGACGTCACCCTTAAAATTATAGGTGCTACAAAAGCCAACATGACTTGG
AAGGTTCACTCCCATGGAAACAACTACACACTTTTGTGTCAGGTTAAACTCCAATATGGAGAAGTGATTC
ATGAGCACAATGTTTCTGTCCACATGAGCGCAAACTACCTCTTCAGTGATCTGGATCCAGACACAAAGTA
CAAGGCTTTTGTGCGCTGTGCAAGTGCCAACCACTTCTGGAAATGGAGCGACTGGACCCAAAAAGAGTTC
AGCACACCCGAGACTGCTCCCTCACAGGCTCTTGATGTATGGAGACAAGTGTGGTCGGAGAATGGAAGAC
GCATTGTGACTTTATTCTGGAAGCCACTATTAAAATCACAGGCCAATGGCAAAATCATATCCTATAATAT
AGTTGTAGAAAATGAAGCCAAACCAACTGAGTCAGAACACTACTGTGTCTGGGCACCAGCCCTCAGCACA
AACCTGAGCCTTGACCTGCAACCTTACAAGATTCGCATCACAGCCAACAACAGCATGGGGGCATCTCCTG
AGTCCTTGATGGTCCTTTCTAATGATTCTGGACACGAGGTCAAGGAAAAGACAATTAAAGGTATAAAGGA
TGCATTCAATATTTCTTGGGAGCCCGTATCTGGAGACACGATGGGCTATGTTGTGGACTGGTGTGCACAT
TCCCAGGACCAACGCTGTGATTTGCAGTGGAAGAACCTTGGTCCCAATACCACAAGCACCACCATCACCT
CAGATGATTTTAAACCAGGCGTCCGTTACAACTTCAGAATTTTTGAAAGGTCTGTGGAACACAAAGCTCG
GTTAGTAGAGAAACAAAGAGGATACACCCAGGAACTGGCTCCTTTGGTGAATCCAAAAGTGGAGATTCCT
TACTCGACCCCTAACTCCTTCGTTCTAAGATGGCCAGATTATGACAGCGACTTCCAGGCTGGTTTTATAA
AAGGGTACCTCGTGTATGTGAAATCCAAGGAGATGCAGTGCAACCAACCCTGGGAAAGGACCCTCCTTCC
AGATAATTCAGTCCTCTGTAAATACGACATCAATGGCTCAGAGACAAAGACACTCACCGTGGAAAACCTT
CAGCCAGAGTCCCTCTATGAGTTTTTCGTCACTCCGTACACCAGCGCTGGCCCAGGACCCAATGAAACGT
TCACAAAGGTCACAACTCCAGATGCACGCTCCCACATGCTGCTGCAGATCATACTACCCATGACCCTCTG
CGTCTTGCTCAGCATCATTGTCTGCTACTGGAAAAGTCAGTGGGTGAAGGAGAAGTGCTACCCTGACATT
CCCAATCCGTACAAGAGCAGCATTCTGTCACTCATAAAATCCAAGAAGAATCCTCACTTAATAATGAATG
TCAAAGACTGCATTCCAGATGTCCTTGAAGTGATAAACAAAGCAGAAGGCAGCAAGACACAGTGTGTAGG
CTCTGGGAAACTTCACATTGAAGATGTACCCACTAAGCCGCCAATCGTGCCAACAGAAAAGGATTCCTCA
GGGCCTGTGCCCTGCATCTTCTTTGAGAATTTTACTTACGATCAGTCAGCTTTTGACTCTGGTTCCCATG
GCCTCATTCCAGGTCCCCTAAAAGACACAGCACACCAACTTGGACTATTGGCTCCACCTAACAAGTTCCA
GAACGTATTAAAAAATGACTACATGAAGCCCCTGGTCGAAAGTCCAACTGAAGAAACTAGCTTGATTTAT
GTGTCACAGCTGGCTTCACCCATGTGCGGAGACAAGGACACGCTTGCCACAGAACCACCCGTGCCAGTGC
ATGGTTCAGAGTATAAAAGGCAAATGGTAGTTCCCGGGAGCCTCGCATCACCTTCTCTGAAGGAGGATAA
CAGCTTGACCTCAACGGTCCTCTTAGGCCAAGGTGAACAGTAA

Translation (970 aa):
MAFSVVLHPAFLLAVLSLRASRSEVLEEPLPLTPEIHKVSFQLKLQEVNLEWTVPALTHEELNMIFQIEI
SRLNISNTIWVENYSTTVKREEAVRWNWTSDIPLECVKHFIRIRALVDDTKSLPQSSWGNWSSWKEVNAK
VSVEPDKSLIFPKDKVLEEGSNVTICLMYGQNVYNVSCKLQDEPIHGEQLDSHVSLLKLNNVVFLSDTGT
NINCQATKGPKRIFGTVLFVSKVLEEPKNVSCETRDFKTLDCSWEPGVDTTLTWRKQRFQNYTLCESFSK
RCEVSNYRNSYTWQITEGSQEMYNFTLTAENQLRKRSVNINFNLTHRVHPKAPQDVTLKIIGATKANMTW
KVHSHGNNYTLLCQVKLQYGEVIHEHNVSVHMSANYLFSDLDPDTKYKAFVRCASANHFWKWSDWTQKEF
STPETAPSQALDVWRQVWSENGRRIVTLFWKPLLKSQANGKIISYNIVVENEAKPTESEHYCVWAPALST
NLSLDLQPYKIRITANNSMGASPESLMVLSNDSGHEVKEKTIKGIKDAFNISWEPVSGDTMGYVVDWCAH
SQDQRCDLQWKNLGPNTTSTTITSDDFKPGVRYNFRIFERSVEHKARLVEKQRGYTQELAPLVNPKVEIP
YSTPNSFVLRWPDYDSDFQAGFIKGYLVYVKSKEMQCNQPWERTLLPDNSVLCKYDINGSETKTLTVENL
QPESLYEFFVTPYTSAGPGPNETFTKVTTPDARSHMLLQIILPMTLCVLLSIIVCYWKSQWVKEKCYPDI
PNPYKSSILSLIKSKKNPHLIMNVKDCIPDVLEVINKAEGSKTQCVGSGKLHIEDVPTKPPIVPTEKDSS
GPVPCIFFENFTYDQSAFDSGSHGLIPGPLKDTAHQLGLLAPPNKFQNVLKNDYMKPLVESPTEETSLIY
VSQLASPMCGDKDTLATEPPVPVHGSEYKRQMVVPGSLASPSLKEDNSLTSTVLLGQGEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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