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Report for CCDS5944.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
5944.1 |
Public |
Homo sapiens |
7 |
RNF32 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:140545](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:5944.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:140545](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 5944.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000317955.10 |
ENSP00000315950.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000317955.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000315950.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000317955](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000315950](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000392743.6 |
ENSP00000376499.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000392743.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000376499.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000392743](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000376499](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000405335.5 |
ENSP00000385285.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000405335.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000385285.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000405335](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000385285](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000432459.6 |
ENSP00000405588.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000432459.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000405588.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000432459](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000405588](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001184996.2 |
NP_001171925.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001184996.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001171925.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001184996](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001171925](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001171925.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001184997.1 |
NP_001171926.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001184997.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001171926.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001184997](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001171926](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001171926.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_030936.4 |
NP_112198.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_030936.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_112198.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_030936](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_112198](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_112198.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 5944.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1089 nt): ATGTTAAAAAATAAGGGTCACTCATCTAAGAAAGATAACTTGGCAGTCAATGCAGTTGCTTTACAAGATC ACATTTTACATGATCTTCAACTTCGAAATCTTTCAGTTGCAGATCATTCTAAGACACAAGTACAAAAGAA AGAGAACAAATCTCTAAAAAGAGATACAAAGGCAATAATAGATACTGGACTTAAAAAAACTACACAGTGC CCCAAACTAGAAGACTCAGAAAAAGAATATGTTCTTGATCCCAAACCGCCGCCGTTGACTTTGGCACAGA AGTTGGGCCTCATTGGGCCTCCACCACCTCCACTGTCATCAGATGAATGGGAGAAGGTGAAACAGCGCTC TCTCCTGCAAGGGGACTCCGTGCAACCATGCCCCATCTGTAAAGAAGAATTCGAGCTTCGTCCTCAGGTG CTGCTTTCATGCTCCCATGTGTTCCACAAAGCATGTCTTCAGGCTTTTGAAAAGTTCACAAATAAGAAAA CCTGTCCTCTCTGTAGAAAGAACCAGTATCAAACCCGAGTGATACACGATGGGGCCCGCCTGTTCAGAAT CAAGTGTGTGACCAGAATCCAAGCCTACTGGAGAGGATGTGTTGTTAGAAAGTGGTACAGAAACCTGAGG AAAACAGTACCTCCCACAGATGCCAAGTTAAGAAAAAAATTCTTTGAAAAAAAGTTCACAGAAATCAGCC ACCGCATCCTGTGCTCATACAACACCAACATTGAAGAGCTCTTTGCAGAAATCGATCAGTGCTTGGCCAT AAATCGAAGTGTTCTTCAGCAGTTGGAAGAAAAATGTGGCCATGAGATCACAGAAGAGGAATGGGAGAAA ATCCAAGTGCAGGCTCTGCGCCGGGAGACCCACGAGTGCTCCATCTGCCTGGCCCCTCTCTCCGCTGCTG GCGGTCAGCGCGTGGGTGCAGGCAGGCGTTCCAGAGAGATGGCCCTCCTGTCCTGCTCACATGTGTTCCA CCATGCGTGTCTGCTGGCACTAGAGGAGTTCTCCGTGGGAGACAGGCCTCCTTTCCATGCCTGTCCTCTC TGCCGCTCCTGCTACCAGAAGAAGATTCTTGAATGTTGA
Translation (362 aa): MLKNKGHSSKKDNLAVNAVALQDHILHDLQLRNLSVADHSKTQVQKKENKSLKRDTKAIIDTGLKKTTQC PKLEDSEKEYVLDPKPPPLTLAQKLGLIGPPPPPLSSDEWEKVKQRSLLQGDSVQPCPICKEEFELRPQV LLSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQTRVIHDGARLFRIKCVTRIQAYWRGCVVRKWYRNLR KTVPPTDAKLRKKFFEKKFTEISHRILCSYNTNIEELFAEIDQCLAINRSVLQQLEEKCGHEITEEEWEK IQVQALRRETHECSICLAPLSAAGGQRVGAGRRSREMALLSCSHVFHHACLLALEEFSVGDRPPFHACPL CRSCYQKKILEC
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