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Report for CCDS29685.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29685.1 Public Mus musculus 19 Gna14 23 108 98 CCDS HistoryNCBI Gene:14675Re-query CCDS DB by CCDS ID:29685.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29685.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025602.3 ENSMUSP00000025602.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025602.3Link to Ensembl Protein Viewer:ENSMUSP00000025602.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000025602Re-query CCDS DB by Protein ID:ENSMUSP00000025602
Original member Current member NCBI NM_008137.4 NP_032163.3 Accepted alive Link to Nucleotide Sequence:NM_008137.4Link to Protein Sequence:NP_032163.3Re-query CCDS DB by Nucleotide ID:NM_008137Re-query CCDS DB by Protein ID:NP_032163Link to BLAST:NP_032163.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032163.3 355 P30677 355 100% 0 0

Chromosomal Locations for CCDS 29685.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 16436694 16436817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16533713 16533897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16598940 16599094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16603264 16603392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16604963 16605092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16607983 16608136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16609340 16609530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGGCCGGCTGCTGCTGTTTGTCTGCGGAGGAGAAAGAGTCTCAGCGCATCAGCGCGGAGATCGAGCGGC
AGCTTCGCCGCGACAAGAAGGACGCGCGCCGGGAGCTCAAGCTGCTGTTGCTGGGAACCGGTGAGAGTGG
GAAAAGCACCTTTATCAAGCAGATGAGGATAATCCATGGGTCTGGCTACAGTGATGAAGATAGAAAGGGC
TTCACGAAGCTGGTTTACCAAAACATATTCACGGCCATGCAAGCCATGATCAGAGCAATGGATACCCTGA
GGATACAATACATGTGTGAGCAGAATAAGGAAAATGCCCAGATCATCAGGGAAGTGGAAGTAGACAAGGT
CACTGCACTCTCTAGAGACCAGGTGGCAGCCATCAAGCAGCTGTGGCTGGATCCCGGAATCCAGGAGTGT
TACGACAGGAGGAGGGAGTACCAGCTGTCAGACTCTGCCAAATATTACCTGACGGACATTGAGCGTATCG
CCATGCCCTCTTTCGTGCCAACACAACAGGATGTGCTTCGTGTTAGAGTGCCCACCACTGGCATCATAGA
ATATCCATTCGACCTGGAAAACATCATCTTCCGAATGGTGGATGTTGGTGGCCAGCGATCTGAACGACGG
AAATGGATTCACTGCTTTGAGAGTGTCACCTCCATCATTTTCTTGGTTGCTCTGAGTGAATATGACCAGG
TTCTGGCTGAGTGTGACAATGAGAACCGCATGGAGGAGAGCAAAGCCCTGTTTAGAACCATCATCACCTA
CCCCTGGTTTCTGAACTCCTCCGTGATTCTGTTCTTAAACAAGAAGGATCTTCTAGAGGAGAAAATCATG
TACTCTCATCTAATTAGCTACTTCCCAGAGTACACAGGACCAAAGCAAGATGTCAAAGCGGCCAGGGACT
TTATCCTGAAGCTGTATCAAGACCAGAATCCTGACAAAGAGAAGGTTATCTATTCTCACTTCACTTGTGC
TACAGACACCGAGAATATCCGCTTTGTGTTTGCTGCTGTCAAAGACACAATCCTACAGCTAAACCTACGG
GAGTTCAACTTGGTGTAA

Translation (355 aa):
MAGCCCLSAEEKESQRISAEIERQLRRDKKDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDRKG
FTKLVYQNIFTAMQAMIRAMDTLRIQYMCEQNKENAQIIREVEVDKVTALSRDQVAAIKQLWLDPGIQEC
YDRRREYQLSDSAKYYLTDIERIAMPSFVPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERR
KWIHCFESVTSIIFLVALSEYDQVLAECDNENRMEESKALFRTIITYPWFLNSSVILFLNKKDLLEEKIM
YSHLISYFPEYTGPKQDVKAARDFILKLYQDQNPDKEKVIYSHFTCATDTENIRFVFAAVKDTILQLNLR
EFNLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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