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Report for CCDS49989.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49989.1 Public Mus musculus 17 Fpr-rs3 23 108 98 CCDS HistoryNCBI Gene:14290Re-query CCDS DB by CCDS ID:49989.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49989.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071189.1 ENSMUSP00000071179.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071189.1Link to Ensembl Protein Viewer:ENSMUSP00000071179.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000071189Re-query CCDS DB by Protein ID:ENSMUSP00000071179
Original member Current member NCBI NM_008040.2 NP_032066.2 Accepted alive Link to Nucleotide Sequence:NM_008040.2Link to Protein Sequence:NP_032066.2Re-query CCDS DB by Nucleotide ID:NM_008040Re-query CCDS DB by Protein ID:NP_032066Link to BLAST:NP_032066.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032066.2 343 O88537 343 100% 0 0

Chromosomal Locations for CCDS 49989.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 20623846 20624877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGGAAGCCAACTCCTCCATCCCACTGAATGGCTCAGAAGTGGTGTTTTATGATTCTACCACCTCCAGAG
TTCTATGGATCCTCTCAGTGATAGTTCTCTCCATAACCTTTGTCCTTGGTGTGCTAGGTAATGGGCTTGT
GATTTGGGTGGCTGGGTTCCGGATGGCACACACTGTGACCACCATCTGTTATCTGAACCTGGCTTTGGGT
GACTTCTCTTTCATGGTTACTTTACCACTACACATCATCTCAATGGTCATGAAAGGAAAATGGCTTTTTG
GTTGGTTCCTTTGCAAATTTGTTCTCAGCATTGTGCACATAAACCTTTTTGTAAGTGTTTTCTTAATCAC
TCTCATTGCCATGGATCGTTGTACTTGTGTCCTGCACCCAGTATGGGTTCAGAATCACCGAACTGTGAGT
CTGGCCAGGAAAGTGATTGTTGGAGCTTGGATTCTTTCTCTGCTGCTTACATTGCCACATTTTCTCTTCT
TGACTACAGTGAGAGATGCAAGAGGCGAAGTGCACTGTACATGTAACTTTGAATCTGTGGTTGCAAACCC
TGAGGAGCAATTAAAGGTGTCAATTACCGTGAGCACAGCAACAGGAATCATCAGTTTTATTATTGGCTTC
AGCCTACCCATGTCCTTCATTGCCGTCTGCTATGGACTCATGGCTGCCAAGATTTGTAGAAAAGGCTTTC
TGAACTCCAGCCGTCCTTTACGTGTTCTCACTGCTGTAGCAATTTCCTTCTTTATGTGTTGGTTCCCTTT
TCAACTGATTATTCTTCTAGGTAATATCTGGAATAAGGAGACACCAAGCAGCATTCACATTTTGTTGAAC
CCAGCAAGCACACTGGCTTCCTTCAACAGCTGTCTCAACCCAATACTCTATGTCTTTCTTGGTCAAGAAT
TTAGAGAGAAACTGATATATTCCCTGTCTGCCAGTCTGGAGAGGGCGCTGCGAGAAGACTCAGTCCTAAG
CAGTGGCAAAAGCAGCAACTTTTCTTCATGTCCTGCCGACTCTGAACTATAG

Translation (343 aa):
MEANSSIPLNGSEVVFYDSTTSRVLWILSVIVLSITFVLGVLGNGLVIWVAGFRMAHTVTTICYLNLALG
DFSFMVTLPLHIISMVMKGKWLFGWFLCKFVLSIVHINLFVSVFLITLIAMDRCTCVLHPVWVQNHRTVS
LARKVIVGAWILSLLLTLPHFLFLTTVRDARGEVHCTCNFESVVANPEEQLKVSITVSTATGIISFIIGF
SLPMSFIAVCYGLMAAKICRKGFLNSSRPLRVLTAVAISFFMCWFPFQLIILLGNIWNKETPSSIHILLN
PASTLASFNSCLNPILYVFLGQEFREKLIYSLSASLERALREDSVLSSGKSSNFSSCPADSEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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