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Report for CCDS13879.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13879.1 |
Public |
Homo sapiens |
22 |
GAL3ST1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9514](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13879.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9514](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 22 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13879.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000338911.6 |
ENSP00000343234.5 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000338911.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000343234.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000338911](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000343234](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000402369.5 |
ENSP00000384122.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000402369.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000384122.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000402369](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000384122](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000401975.5 |
ENSP00000384388.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000401975.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000384388.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000401975](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000384388](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000406361.6 |
ENSP00000385207.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000406361.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000385207.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000406361](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000385207](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000402321.5 |
ENSP00000385735.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000402321.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000385735.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000402321](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000385735](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000406955.5 |
ENSP00000385825.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000406955.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000385825.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000406955](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000385825](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318103.2 |
NP_001305032.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318103.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305032.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318103](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305032](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305032.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318104.2 |
NP_001305033.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318104.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305033.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318104](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305033](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305033.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318105.2 |
NP_001305034.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318105.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305034.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318105](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305034](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305034.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318106.2 |
NP_001305035.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318106.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305035.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318106](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305035](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305035.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318108.2 |
NP_001305037.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318108.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305037.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318108](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305037](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305037.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318110.2 |
NP_001305039.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318110.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305039.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318110](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305039](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305039.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318111.2 |
NP_001305040.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318111.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305040.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318111](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305040](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305040.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318112.2 |
NP_001305041.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318112.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305041.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318112](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305041](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305041.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318113.2 |
NP_001305042.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318113.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305042.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318113](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305042](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305042.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318115.2 |
NP_001305044.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318115.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305044.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318115](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305044](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305044.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318116.2 |
NP_001305045.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318116.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305045.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318116](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305045](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305045.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_004861.3 |
NP_004852.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_004861.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_004852.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_004861](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_004852](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_004852.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13879.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1272 nt): ATGCTGCCACCGCAGAAGAAGCCCTGGGAGTCCATGGCTAAGGGGCTGGTGCTGGGCGCGCTCTTCACTA GTTTCCTGCTGCTGGTGTACTCCTATGCCGTGCCCCCGCTGCATGCCGGCCTGGCCTCCACGACCCCGGA GGCCGCAGCGTCCTGCTCTCCACCTGCACTCGAGCCAGAGGCAGTGATCCGGGCCAACGGCTCGGCGGGG GAGTGCCAGCCGCGGCGCAACATCGTGTTCTTGAAGACGCACAAGACGGCCAGCAGCACCCTGCTCAACA TCCTGTTCCGCTTCGGCCAGAAGCACCGGCTCAAGTTCGCCTTCCCTAACGGCCGCAATGACTTCGACTA CCCGACCTTCTTCGCCCGCAGCCTGGTGCAGGACTATCGGCCCGGGGCCTGCTTCAACATCATCTGCAAC CACATGCGCTTCCACTACGACGAGGTGCGCGGCCTGGTGCCGACCAACGCCATCTTCATCACGGTGCTCC GCGACCCCGCCCGCTTGTTCGAGTCCTCCTTCCACTACTTCGGGCCGGTGGTGCCCCTCACGTGGAAGCT CTCGGCCGGCGACAAGCTGACCGAGTTCCTGCAAGACCCGGATCGCTACTACGACCCCAACGGCTTCAAT GCCCACTACCTCCGAAACCTGCTCTTCTTCGACCTGGGCTATGACAACAGCCTGGACCCCAGCAGCCCGC AGGTGCAGGAGCACATCCTGGAGGTGGAGCGTCGCTTCCACCTGGTGCTCCTTCAAGAGTACTTCGACGA GTCGCTGGTGCTGCTGAAGGACCTGCTGTGCTGGGAGCTGGAGGACGTGCTCTACTTCAAGCTCAACGCC CGCCGCGACTCGCCCGTGCCGCGGCTCTCGGGGGAGCTGTATGGGCGCGCCACCGCCTGGAACATGCTGG ACTCCCACCTCTACCGCCACTTCAACGCCAGCTTCTGGCGCAAGGTGGAGGCCTTCGGGCGGGAGCGCAT GGCCCGCGAGGTGGCCGCCCTGCGCCATGCCAACGAGCGCATGCGGACCATCTGCATCGACGGGGGCCAC GCCGTGGACGCCGCCGCCATCCAGGACGAGGCCATGCAGCCCTGGCAGCCGCTGGGCACCAAGTCCATCC TGGGCTACAACCTCAAGAAGAGCATCGGGCAGCGGCACGCGCAGCTCTGCCGGCGCATGCTCACGCCCGA GATCCAGTACCTGATGGACCTCGGCGCCAACCTGTGGGTCACCAAGCTCTGGAAGTTCATTCGCGATTTC CTGCGGTGGTGA
Translation (423 aa): MLPPQKKPWESMAKGLVLGALFTSFLLLVYSYAVPPLHAGLASTTPEAAASCSPPALEPEAVIRANGSAG ECQPRRNIVFLKTHKTASSTLLNILFRFGQKHRLKFAFPNGRNDFDYPTFFARSLVQDYRPGACFNIICN HMRFHYDEVRGLVPTNAIFITVLRDPARLFESSFHYFGPVVPLTWKLSAGDKLTEFLQDPDRYYDPNGFN AHYLRNLLFFDLGYDNSLDPSSPQVQEHILEVERRFHLVLLQEYFDESLVLLKDLLCWELEDVLYFKLNA RRDSPVPRLSGELYGRATAWNMLDSHLYRHFNASFWRKVEAFGRERMAREVAALRHANERMRTICIDGGH AVDAAAIQDEAMQPWQPLGTKSILGYNLKKSIGQRHAQLCRRMLTPEIQYLMDLGANLWVTKLWKFIRDF LRW
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