U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GABPA GA binding protein transcription factor subunit alpha [ Tursiops truncatus (common bottlenose dolphin) ]

    Gene ID: 101325857, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GABPA
    Gene description
    GA binding protein transcription factor subunit alpha
    See related
    EnsemblRapid:ENSTTRG00000004785
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tursiops truncatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current mTurTru1.mat.Y (GCF_011762595.1) 4 NC_047037.1 (125275703..125311908)
    101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844625.1 (17263684..17299824, complement)

    Chromosome 4 - NC_047037.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L39 Neighboring gene junctional adhesion molecule 2 Neighboring gene ATP synthase peripheral stalk subunit F6 Neighboring gene amyloid beta precursor protein Neighboring gene small nucleolar RNA SNORA67 Neighboring gene putative monooxygenase p33MONOX

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    GA-binding protein alpha chain
    Names
    GA binding protein transcription factor alpha subunit

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mTurTru1.mat.Y Primary Assembly

    Genomic

    1. NC_047037.1 Reference mTurTru1.mat.Y Primary Assembly

      Range
      125275703..125311908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004318113.3 → XP_004318161.1  GA-binding protein alpha chain

      See identical proteins and their annotated locations for XP_004318161.1

      UniProtKB/TrEMBL
      A0A2U3V3A6
      Related
      ENSTTRP00000004506.2, ENSTTRT00000004781.2
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    2. XM_019922844.2 → XP_019778403.1  GA-binding protein alpha chain

      UniProtKB/TrEMBL
      A0A2U3V3A6
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain

    3. XM_019922845.2 → XP_019778404.1  GA-binding protein alpha chain

      UniProtKB/TrEMBL
      A0A2U3V3A6
      Conserved Domains (3) summary
      cd08534
      Location:168 → 254
      SAM_PNT-GABP-alpha; Sterile alpha motif (SAM)/Pointed domain of GA-binding protein (GABP) alpha chain
      smart00413
      Location:319 → 403
      ETS; erythroblast transformation specific domain
      pfam11620
      Location:40 → 119
      GABP-alpha; GA-binding protein alpha chain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.